Probe CUST_33570_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_33570_PI426222305 | JHI_St_60k_v1 | DMT400045411 | CACAACCCACTGTATGTATGTTCTTTATATGTATCATCAGTATACACTAAATCAAGGACC |
All Microarray Probes Designed to Gene DMG400017619
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_33497_PI426222305 | JHI_St_60k_v1 | DMT400045410 | TTTCTATCTATGAGGTAGAGGTAGGAGGTAAGGTCTGCGTATACTCTACCTTTACCAGGC |
| CUST_33482_PI426222305 | JHI_St_60k_v1 | DMT400045409 | CACAACCCACTGTATGTATGTTCTTTATATGTATCATCAGTATACACTAAATCAAGGACC |
| CUST_33570_PI426222305 | JHI_St_60k_v1 | DMT400045411 | CACAACCCACTGTATGTATGTTCTTTATATGTATCATCAGTATACACTAAATCAAGGACC |
Microarray Signals from CUST_33570_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 30.6076 | 8.02359 | 0.832741 | 0.168159 |
| ABA 1h | 76.8941 | 14.1278 | 2.43412 | 0.379328 |
| ACC 1h | 27.4071 | 4.16589 | 0.760954 | 0.121961 |
| BABA 1h | 34.1527 | 8.79856 | 0.951277 | 0.194378 |
| Chitin 1h | 33.4653 | 9.02206 | 1.01125 | 0.190995 |
| Epi 1h | 26.8397 | 4.29064 | 0.882179 | 0.123147 |
| SA 1h | 38.0639 | 3.92594 | 1.07028 | 0.171613 |
| Me-JA 1h | 27.6378 | 3.72993 | 0.97411 | 0.143549 |
| Control 6h | 38.2215 | 9.01437 | 1.04239 | 0.193054 |
| ABA 6h | 96.6308 | 14.2881 | 2.59395 | 0.23247 |
| ACC 6h | 38.6021 | 4.71686 | 0.975497 | 0.128548 |
| BABA 6h | 40.8142 | 11.6061 | 0.951407 | 0.330655 |
| Chitin 6h | 32.3573 | 4.34726 | 0.869496 | 0.151762 |
| Epi 6h | 49.2038 | 15.8533 | 1.15854 | 0.368206 |
| SA 6h | 28.4686 | 3.98695 | 0.832904 | 0.11797 |
| Me-JA 6h | 43.0122 | 9.92807 | 1.18542 | 0.203085 |
Source Transcript PGSC0003DMT400045411 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT2G02590.1 | +3 | 4e-44 | 159 | 102/127 (80%) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Putative small multi-drug export (InterPro:IPR009577); Has 405 Blast hits to 405 proteins in 185 species: Archae - 65; Bacteria - 295; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). | chr2:704977-706494 FORWARD LENGTH=324 |