Probe CUST_2336_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2336_PI426222305 | JHI_St_60k_v1 | DMT400028816 | ATGGTTCAAGTTCCCGGGCATGTCTTGTTATTGGGTGCATCTCTACAAGTGAAATTGACG |
All Microarray Probes Designed to Gene DMG402011095
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2070_PI426222305 | JHI_St_60k_v1 | DMT400028820 | TGAAAGATGAACTTGAAAATCTTGCCAGCACGATTCTCCCTCCAAATCTATAAATTGGCG |
| CUST_2446_PI426222305 | JHI_St_60k_v1 | DMT400028819 | TGAAAGATGAAGTTGAAAATCTTGCCAGCACGATTCTCCCTCCAAATCTATAAATTGGCG |
| CUST_2336_PI426222305 | JHI_St_60k_v1 | DMT400028816 | ATGGTTCAAGTTCCCGGGCATGTCTTGTTATTGGGTGCATCTCTACAAGTGAAATTGACG |
Microarray Signals from CUST_2336_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 3396.04 | 308.038 | 2.39896 | 0.138527 |
| ABA 1h | 2857.43 | 433.841 | 2.24754 | 0.315598 |
| ACC 1h | 2377.39 | 554.927 | 1.56845 | 0.330103 |
| BABA 1h | 2513.95 | 677.484 | 1.68362 | 0.400407 |
| Chitin 1h | 2332.75 | 220.933 | 1.83091 | 0.105747 |
| Epi 1h | 2700.3 | 242.699 | 2.20408 | 0.22945 |
| SA 1h | 3115.75 | 675.625 | 2.06612 | 0.310145 |
| Me-JA 1h | 1135.07 | 113.585 | 0.979192 | 0.0566235 |
| Control 6h | 571.125 | 146.32 | 0.381554 | 0.100434 |
| ABA 6h | 3520.18 | 1375.83 | 1.946 | 0.909493 |
| ACC 6h | 1222.6 | 146.011 | 0.748272 | 0.0526121 |
| BABA 6h | 451.558 | 86.6438 | 0.277503 | 0.0417352 |
| Chitin 6h | 293.271 | 24.0343 | 0.194889 | 0.011582 |
| Epi 6h | 532.441 | 147.559 | 0.304924 | 0.0819247 |
| SA 6h | 495.03 | 108.623 | 0.336292 | 0.045538 |
| Me-JA 6h | 535.102 | 50.7027 | 0.379152 | 0.0220527 |
Source Transcript PGSC0003DMT400028816 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g085150.1 | +2 | 3e-76 | 237 | 119/139 (86%) | evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch10 gene_region:63759473-63761440 transcript_region:SL2.50ch10:63759473..63761440- go_terms:GO:0016765 functional_description:Undecaprenyl pyrophosphate synthase (AHRD V1 ***- D8G636_9CYAN); contains Interpro domain(s) IPR001441 Di-trans-poly-cis-decaprenylcistransferase-like |
| TAIR PP10 | AT5G58770.1 | +2 | 2e-55 | 183 | 89/131 (68%) | Undecaprenyl pyrophosphate synthetase family protein | chr5:23734396-23735495 FORWARD LENGTH=310 |