Probe CUST_2070_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2070_PI426222305 | JHI_St_60k_v1 | DMT400028820 | TGAAAGATGAACTTGAAAATCTTGCCAGCACGATTCTCCCTCCAAATCTATAAATTGGCG |
All Microarray Probes Designed to Gene DMG402011095
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_2070_PI426222305 | JHI_St_60k_v1 | DMT400028820 | TGAAAGATGAACTTGAAAATCTTGCCAGCACGATTCTCCCTCCAAATCTATAAATTGGCG |
| CUST_2446_PI426222305 | JHI_St_60k_v1 | DMT400028819 | TGAAAGATGAAGTTGAAAATCTTGCCAGCACGATTCTCCCTCCAAATCTATAAATTGGCG |
| CUST_2336_PI426222305 | JHI_St_60k_v1 | DMT400028816 | ATGGTTCAAGTTCCCGGGCATGTCTTGTTATTGGGTGCATCTCTACAAGTGAAATTGACG |
Microarray Signals from CUST_2070_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 17.2882 | 3.40911 | 0.799112 | 0.177923 |
| ABA 1h | 18.5094 | 6.21726 | 0.853132 | 0.438406 |
| ACC 1h | 24.9849 | 3.75461 | 1.13456 | 0.178492 |
| BABA 1h | 23.0935 | 6.34946 | 1.02723 | 0.477928 |
| Chitin 1h | 16.7713 | 3.39547 | 0.876402 | 0.187848 |
| Epi 1h | 11.6651 | 3.26342 | 0.62729 | 0.188351 |
| SA 1h | 17.4253 | 3.85203 | 0.759156 | 0.165943 |
| Me-JA 1h | 18.7618 | 6.26683 | 0.923209 | 0.605726 |
| Control 6h | 26.6635 | 5.96232 | 1.18877 | 0.210216 |
| ABA 6h | 26.1848 | 3.96095 | 1.16924 | 0.178289 |
| ACC 6h | 27.8343 | 4.43949 | 1.15091 | 0.181036 |
| BABA 6h | 38.3992 | 12.4497 | 1.47251 | 0.438515 |
| Chitin 6h | 27.8516 | 4.26004 | 1.2335 | 0.192979 |
| Epi 6h | 33.5093 | 6.0367 | 1.36384 | 0.355963 |
| SA 6h | 28.5519 | 11.86 | 1.13591 | 0.808645 |
| Me-JA 6h | 14.5548 | 5.17033 | 0.595732 | 0.271923 |
Source Transcript PGSC0003DMT400028820 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | Solyc10g085150.1 | +2 | 4e-157 | 450 | 228/296 (77%) | evidence_code:10F0H1E1IEG genomic_reference:SL2.50ch10 gene_region:63759473-63761440 transcript_region:SL2.50ch10:63759473..63761440- go_terms:GO:0016765 functional_description:Undecaprenyl pyrophosphate synthase (AHRD V1 ***- D8G636_9CYAN); contains Interpro domain(s) IPR001441 Di-trans-poly-cis-decaprenylcistransferase-like |
| TAIR PP10 | AT5G58770.1 | +2 | 2e-98 | 300 | 146/246 (59%) | Undecaprenyl pyrophosphate synthetase family protein | chr5:23734396-23735495 FORWARD LENGTH=310 |