Probe CUST_21872_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_21872_PI426222305 | JHI_St_60k_v1 | DMT400043601 | TTACGTGGATACCTCTGCTATTGCCTCATCATATTGCATGCAGCTATCCCATTCCTACTA |
All Microarray Probes Designed to Gene DMG400016931
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_21817_PI426222305 | JHI_St_60k_v1 | DMT400043603 | CATGGAGGTGCAGGGGAACTTTTTTAACATATTATCTTCCTATTTAGTTGAACTTCCATA |
| CUST_21816_PI426222305 | JHI_St_60k_v1 | DMT400043602 | TTACGTGGATACCTCTGCTATTGCCTCATCATATTGCATGCAGCTATCCCATTCCTACTA |
| CUST_21872_PI426222305 | JHI_St_60k_v1 | DMT400043601 | TTACGTGGATACCTCTGCTATTGCCTCATCATATTGCATGCAGCTATCCCATTCCTACTA |
Microarray Signals from CUST_21872_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 5.32465 | 3.08773 | 0.957584 | 0.551704 |
| ABA 1h | 5.07696 | 2.94146 | 1.0342 | 0.59543 |
| ACC 1h | 6.17102 | 3.61091 | 1.06611 | 0.617366 |
| BABA 1h | 5.64559 | 3.2757 | 1.04748 | 0.606553 |
| Chitin 1h | 5.27121 | 3.07084 | 1.07665 | 0.605198 |
| Epi 1h | 7.45137 | 3.04605 | 1.43411 | 0.673813 |
| SA 1h | 5.32365 | 3.09246 | 0.92829 | 0.53904 |
| Me-JA 1h | 5.38266 | 3.13327 | 1.17885 | 0.680622 |
| Control 6h | 5.4512 | 3.15963 | 0.973728 | 0.563881 |
| ABA 6h | 5.62985 | 3.26377 | 0.948003 | 0.549052 |
| ACC 6h | 6.34114 | 3.76316 | 0.967696 | 0.560364 |
| BABA 6h | 6.0411 | 3.50559 | 0.965401 | 0.559202 |
| Chitin 6h | 6.0066 | 3.48144 | 1.01054 | 0.585366 |
| Epi 6h | 6.23967 | 3.65478 | 0.981055 | 0.568338 |
| SA 6h | 5.76605 | 3.33978 | 1.04445 | 0.604883 |
| Me-JA 6h | 7.03665 | 3.13869 | 1.20668 | 0.59096 |
Source Transcript PGSC0003DMT400043601 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT5G36100.1 | +2 | 9e-14 | 73 | 49/163 (30%) | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65090.3); Has 57 Blast hits to 49 proteins in 15 species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:14191711-14193654 REVERSE LENGTH=295 |