Probe CUST_21817_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_21817_PI426222305 | JHI_St_60k_v1 | DMT400043603 | CATGGAGGTGCAGGGGAACTTTTTTAACATATTATCTTCCTATTTAGTTGAACTTCCATA |
All Microarray Probes Designed to Gene DMG400016931
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_21817_PI426222305 | JHI_St_60k_v1 | DMT400043603 | CATGGAGGTGCAGGGGAACTTTTTTAACATATTATCTTCCTATTTAGTTGAACTTCCATA |
| CUST_21816_PI426222305 | JHI_St_60k_v1 | DMT400043602 | TTACGTGGATACCTCTGCTATTGCCTCATCATATTGCATGCAGCTATCCCATTCCTACTA |
| CUST_21872_PI426222305 | JHI_St_60k_v1 | DMT400043601 | TTACGTGGATACCTCTGCTATTGCCTCATCATATTGCATGCAGCTATCCCATTCCTACTA |
Microarray Signals from CUST_21817_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 17.6865 | 5.10147 | 0.833824 | 0.193038 |
| ABA 1h | 12.6555 | 3.02303 | 0.707162 | 0.185509 |
| ACC 1h | 18.2384 | 5.39016 | 0.80983 | 0.263784 |
| BABA 1h | 18.0929 | 8.54046 | 0.783513 | 0.357754 |
| Chitin 1h | 15.9302 | 3.17072 | 0.899398 | 0.187334 |
| Epi 1h | 15.5659 | 3.12075 | 0.906742 | 0.190955 |
| SA 1h | 13.5841 | 3.29756 | 0.633362 | 0.21418 |
| Me-JA 1h | 18.2353 | 8.03536 | 0.958598 | 0.56313 |
| Control 6h | 31.9461 | 13.3466 | 1.38952 | 0.531749 |
| ABA 6h | 232.242 | 56.1656 | 10.4808 | 2.29101 |
| ACC 6h | 19.0278 | 3.90913 | 0.837851 | 0.230449 |
| BABA 6h | 24.4396 | 6.58522 | 1.0335 | 0.283507 |
| Chitin 6h | 33.7558 | 3.99556 | 1.61259 | 0.193041 |
| Epi 6h | 22.4049 | 3.88584 | 1.01603 | 0.17534 |
| SA 6h | 26.5553 | 5.30701 | 1.31971 | 0.449793 |
| Me-JA 6h | 22.9303 | 3.39666 | 1.16449 | 0.177667 |
Source Transcript PGSC0003DMT400043603 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT5G36100.1 | +3 | 2e-13 | 70 | 33/68 (49%) | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G65090.3); Has 57 Blast hits to 49 proteins in 15 species: Archae - 0; Bacteria - 4; Metazoa - 6; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr5:14191711-14193654 REVERSE LENGTH=295 |