Probe CUST_21816_PI426222305 - General Information

Probe IDChip nameTranscript IDProbe Sequence
CUST_21816_PI426222305 JHI_St_60k_v1 DMT400043602 TTACGTGGATACCTCTGCTATTGCCTCATCATATTGCATGCAGCTATCCCATTCCTACTA

All Microarray Probes Designed to Gene DMG400016931

Probe IDChip nameTranscript IDProbe Sequence
CUST_21817_PI426222305 JHI_St_60k_v1 DMT400043603 CATGGAGGTGCAGGGGAACTTTTTTAACATATTATCTTCCTATTTAGTTGAACTTCCATA
CUST_21816_PI426222305 JHI_St_60k_v1 DMT400043602 TTACGTGGATACCTCTGCTATTGCCTCATCATATTGCATGCAGCTATCCCATTCCTACTA
CUST_21872_PI426222305 JHI_St_60k_v1 DMT400043601 TTACGTGGATACCTCTGCTATTGCCTCATCATATTGCATGCAGCTATCCCATTCCTACTA


Microarray Signals from CUST_21816_PI426222305



TreatmentRaw signalRaw Std ErrNormalized signalNormalized Std Err
Control 1h5.366333.114250.959690.554536
ABA 1h5.109732.960111.034680.597244
ACC 1h6.202893.631251.0690.620077
BABA 1h5.690043.304971.052260.609901
Chitin 1h5.312583.095131.078880.607944
Epi 1h5.335183.045061.100020.625839
SA 1h5.353.099580.9297880.538439
Me-JA 1h5.417013.157111.180640.683431
Control 6h5.498733.191460.9789430.567688
ABA 6h5.670393.287420.9517190.551248
ACC 6h6.39143.79440.9719890.562994
BABA 6h6.075253.524210.9676980.560375
Chitin 6h6.045443.502781.013690.586952
Epi 6h6.276453.679690.9833910.570102
SA 6h5.798613.358191.046940.606263
Me-JA 6h5.411873.134310.9705640.562045

Source Transcript PGSC0003DMT400043602 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT1G65090.2 +2 1e-13 74 73/230 (32%) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36100.1); Has 1234 Blast hits to 904 proteins in 178 species: Archae - 0; Bacteria - 58; Metazoa - 431; Fungi - 95; Plants - 83; Viruses - 38; Other Eukaryotes - 529 (source: NCBI BLink). | chr1:24180973-24182668 REVERSE LENGTH=379

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400043602

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