Probe CUST_21816_PI426222305 - General Information
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_21816_PI426222305 | JHI_St_60k_v1 | DMT400043602 | TTACGTGGATACCTCTGCTATTGCCTCATCATATTGCATGCAGCTATCCCATTCCTACTA |
All Microarray Probes Designed to Gene DMG400016931
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_21817_PI426222305 | JHI_St_60k_v1 | DMT400043603 | CATGGAGGTGCAGGGGAACTTTTTTAACATATTATCTTCCTATTTAGTTGAACTTCCATA |
CUST_21816_PI426222305 | JHI_St_60k_v1 | DMT400043602 | TTACGTGGATACCTCTGCTATTGCCTCATCATATTGCATGCAGCTATCCCATTCCTACTA |
CUST_21872_PI426222305 | JHI_St_60k_v1 | DMT400043601 | TTACGTGGATACCTCTGCTATTGCCTCATCATATTGCATGCAGCTATCCCATTCCTACTA |
Microarray Signals from CUST_21816_PI426222305
Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
---|---|---|---|---|
Control 1h | 5.36633 | 3.11425 | 0.95969 | 0.554536 |
ABA 1h | 5.10973 | 2.96011 | 1.03468 | 0.597244 |
ACC 1h | 6.20289 | 3.63125 | 1.069 | 0.620077 |
BABA 1h | 5.69004 | 3.30497 | 1.05226 | 0.609901 |
Chitin 1h | 5.31258 | 3.09513 | 1.07888 | 0.607944 |
Epi 1h | 5.33518 | 3.04506 | 1.10002 | 0.625839 |
SA 1h | 5.35 | 3.09958 | 0.929788 | 0.538439 |
Me-JA 1h | 5.41701 | 3.15711 | 1.18064 | 0.683431 |
Control 6h | 5.49873 | 3.19146 | 0.978943 | 0.567688 |
ABA 6h | 5.67039 | 3.28742 | 0.951719 | 0.551248 |
ACC 6h | 6.3914 | 3.7944 | 0.971989 | 0.562994 |
BABA 6h | 6.07525 | 3.52421 | 0.967698 | 0.560375 |
Chitin 6h | 6.04544 | 3.50278 | 1.01369 | 0.586952 |
Epi 6h | 6.27645 | 3.67969 | 0.983391 | 0.570102 |
SA 6h | 5.79861 | 3.35819 | 1.04694 | 0.606263 |
Me-JA 6h | 5.41187 | 3.13431 | 0.970564 | 0.562045 |
Source Transcript PGSC0003DMT400043602 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 | AT1G65090.2 | +2 | 1e-13 | 74 | 73/230 (32%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36100.1); Has 1234 Blast hits to 904 proteins in 178 species: Archae - 0; Bacteria - 58; Metazoa - 431; Fungi - 95; Plants - 83; Viruses - 38; Other Eukaryotes - 529 (source: NCBI BLink). | chr1:24180973-24182668 REVERSE LENGTH=379 |