Probe CUST_16141_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_16141_PI426222305 | JHI_St_60k_v1 | DMT400062150 | CTTTTAGATCAAATGTAACAATTTCAAGTACTGCTTCCTCTCCTGGCTACACCTTAAGAG |
All Microarray Probes Designed to Gene DMG400024185
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_16115_PI426222305 | JHI_St_60k_v1 | DMT400062147 | GATTCTCTTTCCATCACACCCTTTGTCTATTCTTAGATTCTAGTATATCTACCAAGGATC |
| CUST_16141_PI426222305 | JHI_St_60k_v1 | DMT400062150 | CTTTTAGATCAAATGTAACAATTTCAAGTACTGCTTCCTCTCCTGGCTACACCTTAAGAG |
| CUST_16171_PI426222305 | JHI_St_60k_v1 | DMT400062148 | AAGAAGTTGAAATCAAAATCCCAACCAAAGTTTCCTTCCCACCCGGGTCCAGTATCCGTA |
| CUST_16228_PI426222305 | JHI_St_60k_v1 | DMT400062149 | CTTTTAGATCAAATGTAACAATTTCAAGTACTGCTTCCTCTCCTGGCTACACCTTAAGAG |
Microarray Signals from CUST_16141_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 648.662 | 83.1519 | 1.14864 | 0.0783762 |
| ABA 1h | 573.073 | 92.7227 | 1.13898 | 0.102817 |
| ACC 1h | 672.991 | 127.678 | 1.14067 | 0.14522 |
| BABA 1h | 501 | 99.7794 | 0.893411 | 0.10919 |
| Chitin 1h | 430.51 | 47.8362 | 0.852518 | 0.0497388 |
| Epi 1h | 395.295 | 61.2264 | 0.800691 | 0.128725 |
| SA 1h | 401.129 | 79.1505 | 0.678077 | 0.0890923 |
| Me-JA 1h | 222.622 | 13.4066 | 0.489753 | 0.0364114 |
| Control 6h | 654.187 | 191.255 | 1.04635 | 0.299086 |
| ABA 6h | 476.658 | 27.8695 | 0.805823 | 0.0470074 |
| ACC 6h | 553.361 | 160.778 | 0.798724 | 0.132829 |
| BABA 6h | 684.563 | 137.253 | 1.05559 | 0.19718 |
| Chitin 6h | 778.604 | 95.9428 | 1.29849 | 0.199916 |
| Epi 6h | 766.745 | 200.989 | 1.12515 | 0.449897 |
| SA 6h | 587.004 | 133.612 | 1.0037 | 0.392867 |
| Me-JA 6h | 561.601 | 167.379 | 0.903391 | 0.27148 |
Source Transcript PGSC0003DMT400062150 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT3G02500.1 | +3 | 1e-57 | 194 | 118/256 (46%) | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits to 49 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:519364-521628 FORWARD LENGTH=293 |