Probe CUST_16171_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_16171_PI426222305 | JHI_St_60k_v1 | DMT400062148 | AAGAAGTTGAAATCAAAATCCCAACCAAAGTTTCCTTCCCACCCGGGTCCAGTATCCGTA |
All Microarray Probes Designed to Gene DMG400024185
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_16115_PI426222305 | JHI_St_60k_v1 | DMT400062147 | GATTCTCTTTCCATCACACCCTTTGTCTATTCTTAGATTCTAGTATATCTACCAAGGATC |
| CUST_16141_PI426222305 | JHI_St_60k_v1 | DMT400062150 | CTTTTAGATCAAATGTAACAATTTCAAGTACTGCTTCCTCTCCTGGCTACACCTTAAGAG |
| CUST_16171_PI426222305 | JHI_St_60k_v1 | DMT400062148 | AAGAAGTTGAAATCAAAATCCCAACCAAAGTTTCCTTCCCACCCGGGTCCAGTATCCGTA |
| CUST_16228_PI426222305 | JHI_St_60k_v1 | DMT400062149 | CTTTTAGATCAAATGTAACAATTTCAAGTACTGCTTCCTCTCCTGGCTACACCTTAAGAG |
Microarray Signals from CUST_16171_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 5.81953 | 3.37967 | 0.927903 | 0.537987 |
| ABA 1h | 8.27508 | 3.28949 | 1.37014 | 0.652807 |
| ACC 1h | 9.49702 | 4.33937 | 1.40059 | 0.680124 |
| BABA 1h | 6.88209 | 3.62082 | 1.11924 | 0.601184 |
| Chitin 1h | 5.76187 | 3.36274 | 1.01776 | 0.589378 |
| Epi 1h | 6.22415 | 3.28705 | 1.13166 | 0.607421 |
| SA 1h | 5.91623 | 3.43214 | 0.918947 | 0.532606 |
| Me-JA 1h | 12.4521 | 3.58238 | 2.28654 | 0.866121 |
| Control 6h | 8.74817 | 3.53974 | 1.32782 | 0.601196 |
| ABA 6h | 6.22192 | 3.61083 | 0.934075 | 0.541683 |
| ACC 6h | 6.95607 | 4.13262 | 0.94583 | 0.548231 |
| BABA 6h | 6.74668 | 3.9196 | 0.960546 | 0.556926 |
| Chitin 6h | 9.05452 | 3.91193 | 1.32506 | 0.606155 |
| Epi 6h | 8.53079 | 4.16888 | 1.18498 | 0.595433 |
| SA 6h | 11.5094 | 5.07124 | 1.55707 | 1.01994 |
| Me-JA 6h | 6.9906 | 3.5143 | 1.1038 | 0.573453 |
Source Transcript PGSC0003DMT400062148 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT5G16030.3 | +2 | 1e-50 | 127 | 107/257 (42%) | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:5238242-5240578 FORWARD LENGTH=347 |