Probe CUST_16228_PI426222305 - General Information

Probe IDChip nameTranscript IDProbe Sequence
CUST_16228_PI426222305 JHI_St_60k_v1 DMT400062149 CTTTTAGATCAAATGTAACAATTTCAAGTACTGCTTCCTCTCCTGGCTACACCTTAAGAG

All Microarray Probes Designed to Gene DMG400024185

Probe IDChip nameTranscript IDProbe Sequence
CUST_16115_PI426222305 JHI_St_60k_v1 DMT400062147 GATTCTCTTTCCATCACACCCTTTGTCTATTCTTAGATTCTAGTATATCTACCAAGGATC
CUST_16141_PI426222305 JHI_St_60k_v1 DMT400062150 CTTTTAGATCAAATGTAACAATTTCAAGTACTGCTTCCTCTCCTGGCTACACCTTAAGAG
CUST_16171_PI426222305 JHI_St_60k_v1 DMT400062148 AAGAAGTTGAAATCAAAATCCCAACCAAAGTTTCCTTCCCACCCGGGTCCAGTATCCGTA
CUST_16228_PI426222305 JHI_St_60k_v1 DMT400062149 CTTTTAGATCAAATGTAACAATTTCAAGTACTGCTTCCTCTCCTGGCTACACCTTAAGAG


Microarray Signals from CUST_16228_PI426222305



TreatmentRaw signalRaw Std ErrNormalized signalNormalized Std Err
Control 1h627.078105.2781.15780.114163
ABA 1h542.72156.62891.150490.0667619
ACC 1h644.93999.26021.160660.100253
BABA 1h496.729106.7230.9237750.133423
Chitin 1h399.67159.72150.8242380.056942
Epi 1h396.52672.11490.8352320.164666
SA 1h378.712104.9520.6520120.138836
Me-JA 1h208.15218.66120.4794880.0287062
Control 6h650.634194.2071.094240.311378
ABA 6h490.07828.57060.8717010.0566478
ACC 6h524.831118.2480.8238730.089528
BABA 6h688.715140.5491.116530.211612
Chitin 6h764.67454.02851.355090.138019
Epi 6h755.812182.311.187770.412167
SA 6h582.206134.1041.049870.411136
Me-JA 6h532.52154.6050.9144840.241983

Source Transcript PGSC0003DMT400062149 - Homology to Model Species (BLASTX to E-value < 1e-50)

DatabaseLink to BLAST HitFrameE-valueScore% IdentityDescription
Tomato (ITAG)None-----
TAIR PP10 AT3G02500.1 +3 3e-64 214 136/308 (44%) unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits to 49 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:519364-521628 FORWARD LENGTH=293

Link to Spud DB Genome Browser for Transcript PGSC0003DMT400062149

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