Probe CUST_16228_PI426222305 - General Information
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_16228_PI426222305 | JHI_St_60k_v1 | DMT400062149 | CTTTTAGATCAAATGTAACAATTTCAAGTACTGCTTCCTCTCCTGGCTACACCTTAAGAG |
All Microarray Probes Designed to Gene DMG400024185
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_16115_PI426222305 | JHI_St_60k_v1 | DMT400062147 | GATTCTCTTTCCATCACACCCTTTGTCTATTCTTAGATTCTAGTATATCTACCAAGGATC |
CUST_16141_PI426222305 | JHI_St_60k_v1 | DMT400062150 | CTTTTAGATCAAATGTAACAATTTCAAGTACTGCTTCCTCTCCTGGCTACACCTTAAGAG |
CUST_16171_PI426222305 | JHI_St_60k_v1 | DMT400062148 | AAGAAGTTGAAATCAAAATCCCAACCAAAGTTTCCTTCCCACCCGGGTCCAGTATCCGTA |
CUST_16228_PI426222305 | JHI_St_60k_v1 | DMT400062149 | CTTTTAGATCAAATGTAACAATTTCAAGTACTGCTTCCTCTCCTGGCTACACCTTAAGAG |
Microarray Signals from CUST_16228_PI426222305
Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
---|---|---|---|---|
Control 1h | 627.078 | 105.278 | 1.1578 | 0.114163 |
ABA 1h | 542.721 | 56.6289 | 1.15049 | 0.0667619 |
ACC 1h | 644.939 | 99.2602 | 1.16066 | 0.100253 |
BABA 1h | 496.729 | 106.723 | 0.923775 | 0.133423 |
Chitin 1h | 399.671 | 59.7215 | 0.824238 | 0.056942 |
Epi 1h | 396.526 | 72.1149 | 0.835232 | 0.164666 |
SA 1h | 378.712 | 104.952 | 0.652012 | 0.138836 |
Me-JA 1h | 208.152 | 18.6612 | 0.479488 | 0.0287062 |
Control 6h | 650.634 | 194.207 | 1.09424 | 0.311378 |
ABA 6h | 490.078 | 28.5706 | 0.871701 | 0.0566478 |
ACC 6h | 524.831 | 118.248 | 0.823873 | 0.089528 |
BABA 6h | 688.715 | 140.549 | 1.11653 | 0.211612 |
Chitin 6h | 764.674 | 54.0285 | 1.35509 | 0.138019 |
Epi 6h | 755.812 | 182.31 | 1.18777 | 0.412167 |
SA 6h | 582.206 | 134.104 | 1.04987 | 0.411136 |
Me-JA 6h | 532.52 | 154.605 | 0.914484 | 0.241983 |
Source Transcript PGSC0003DMT400062149 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 | AT3G02500.1 | +3 | 3e-64 | 214 | 136/308 (44%) | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits to 49 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:519364-521628 FORWARD LENGTH=293 |