Probe CUST_52447_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_52447_PI426222305 | JHI_St_60k_v1 | DMT400041560 | GAAATGAGTCTTGCAATGCGTGGTCTATCATATTCATCTGCAATGTTATTAGAGTACTAT |
All Microarray Probes Designed to Gene DMG400016110
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_52448_PI426222305 | JHI_St_60k_v1 | DMT400041559 | AGATTTGAGGCTGGCCATTATGGCTTCAGAAAGATTGCTCATTCTGCAGCCACACAATTG |
| CUST_52449_PI426222305 | JHI_St_60k_v1 | DMT400041557 | GAAATGAGTCTTGCAATGCGTGGTCTATCATATTCATCTGCAATGTTATTAGAGTACTAT |
| CUST_52447_PI426222305 | JHI_St_60k_v1 | DMT400041560 | GAAATGAGTCTTGCAATGCGTGGTCTATCATATTCATCTGCAATGTTATTAGAGTACTAT |
| CUST_52450_PI426222305 | JHI_St_60k_v1 | DMT400041558 | GAAATGAGTCTTGCAATGCGTGGTCTATCATATTCATCTGCAATGTTATTAGAGTACTAT |
Microarray Signals from CUST_52447_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 48.6153 | 6.72772 | 0.686419 | 0.0821003 |
| ABA 1h | 40.0375 | 8.12524 | 0.619553 | 0.115926 |
| ACC 1h | 32.6488 | 13.2183 | 0.348418 | 0.220226 |
| BABA 1h | 50.9587 | 6.7715 | 0.747343 | 0.0647735 |
| Chitin 1h | 59.1926 | 4.56081 | 0.945348 | 0.0883963 |
| Epi 1h | 37.7002 | 12.3056 | 0.533519 | 0.262626 |
| SA 1h | 51.5641 | 8.95434 | 0.702654 | 0.128328 |
| Me-JA 1h | 28.3717 | 6.58778 | 0.469515 | 0.102027 |
| Control 6h | 99.8462 | 19.592 | 1.36859 | 0.181242 |
| ABA 6h | 237.722 | 25.8601 | 3.18269 | 0.207234 |
| ACC 6h | 102.646 | 13.3564 | 1.26396 | 0.13507 |
| BABA 6h | 104.559 | 7.00424 | 1.34187 | 0.0951648 |
| Chitin 6h | 90.8152 | 9.23956 | 1.21436 | 0.0974985 |
| Epi 6h | 102.773 | 19.8276 | 1.26642 | 0.219476 |
| SA 6h | 101.278 | 15.0238 | 1.43896 | 0.0975614 |
| Me-JA 6h | 79.6456 | 23.973 | 1.03422 | 0.278186 |
Source Transcript PGSC0003DMT400041560 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT4G19160.2 | +1 | 8e-57 | 205 | 130/291 (45%) | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr4:10477772-10479947 FORWARD LENGTH=453 |