Probe CUST_10997_PI426222305 - General Information
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_10997_PI426222305 | JHI_St_60k_v1 | DMT400037740 | GGTTATTGGGATAGCTTGGAAAATTTACAAGAGGAGATCAGTCGTTTCCAGAAGAACTGG |
All Microarray Probes Designed to Gene DMG401014557
| Probe ID | Chip name | Transcript ID | Probe Sequence |
|---|---|---|---|
| CUST_11066_PI426222305 | JHI_St_60k_v1 | DMT400037738 | GGTAATTAATAGACTGTATACTGTGACTTACCTTTTCCTGTGAAGCTGTATTGTTTTGGT |
| CUST_11129_PI426222305 | JHI_St_60k_v1 | DMT400037741 | TGTATACTCTCTTCATCATCCACTTACCATCGAAAGTTATGTTTAGTGGATCTTGAGCCT |
| CUST_11025_PI426222305 | JHI_St_60k_v1 | DMT400037742 | CTTCAGCTTCTGGATATTGACAGATAGACGATATAGACCATCGTTCTTCATGTCATTGCT |
| CUST_10997_PI426222305 | JHI_St_60k_v1 | DMT400037740 | GGTTATTGGGATAGCTTGGAAAATTTACAAGAGGAGATCAGTCGTTTCCAGAAGAACTGG |
Microarray Signals from CUST_10997_PI426222305
| Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
|---|---|---|---|---|
| Control 1h | 1076.19 | 150.358 | 1.31007 | 0.0951854 |
| ABA 1h | 794.53 | 53.9097 | 1.10987 | 0.0642519 |
| ACC 1h | 931.076 | 118.026 | 1.10603 | 0.064039 |
| BABA 1h | 690.639 | 148.992 | 0.840944 | 0.121684 |
| Chitin 1h | 586.295 | 62.6276 | 0.799381 | 0.0597745 |
| Epi 1h | 565.215 | 64.4835 | 0.800436 | 0.068308 |
| SA 1h | 804.898 | 58.8025 | 0.967426 | 0.0560139 |
| Me-JA 1h | 422.493 | 43.1075 | 0.636014 | 0.0371197 |
| Control 6h | 1137.33 | 279.304 | 1.31161 | 0.26188 |
| ABA 6h | 522.117 | 30.4786 | 0.607732 | 0.0353732 |
| ACC 6h | 951.698 | 248.036 | 0.963796 | 0.122392 |
| BABA 6h | 948.345 | 180.205 | 1.01689 | 0.175416 |
| Chitin 6h | 1146.09 | 66.2944 | 1.33626 | 0.0772933 |
| Epi 6h | 1135.66 | 148.81 | 1.22974 | 0.198323 |
| SA 6h | 1000.08 | 180.407 | 1.21226 | 0.108663 |
| Me-JA 6h | 769.833 | 257.569 | 0.860546 | 0.2209 |
Source Transcript PGSC0003DMT400037740 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 | AT5G08720.1 | +2 | 0.0 | 873 | 455/663 (69%) | CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: Polyketide cyclase / dehydrase and lipid transport protein (TAIR:AT4G01650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:2841536-2845335 REVERSE LENGTH=719 |