Probe CUST_11129_PI426222305 - General Information
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_11129_PI426222305 | JHI_St_60k_v1 | DMT400037741 | TGTATACTCTCTTCATCATCCACTTACCATCGAAAGTTATGTTTAGTGGATCTTGAGCCT |
All Microarray Probes Designed to Gene DMG401014557
Probe ID | Chip name | Transcript ID | Probe Sequence |
---|---|---|---|
CUST_11129_PI426222305 | JHI_St_60k_v1 | DMT400037741 | TGTATACTCTCTTCATCATCCACTTACCATCGAAAGTTATGTTTAGTGGATCTTGAGCCT |
CUST_10997_PI426222305 | JHI_St_60k_v1 | DMT400037740 | GGTTATTGGGATAGCTTGGAAAATTTACAAGAGGAGATCAGTCGTTTCCAGAAGAACTGG |
CUST_11066_PI426222305 | JHI_St_60k_v1 | DMT400037738 | GGTAATTAATAGACTGTATACTGTGACTTACCTTTTCCTGTGAAGCTGTATTGTTTTGGT |
CUST_11025_PI426222305 | JHI_St_60k_v1 | DMT400037742 | CTTCAGCTTCTGGATATTGACAGATAGACGATATAGACCATCGTTCTTCATGTCATTGCT |
Microarray Signals from CUST_11129_PI426222305
Treatment | Raw signal | Raw Std Err | Normalized signal | Normalized Std Err |
---|---|---|---|---|
Control 1h | 19.9122 | 3.33397 | 1.3336 | 0.232978 |
ABA 1h | 15.8686 | 4.05975 | 1.14679 | 0.374625 |
ACC 1h | 20.4818 | 4.8039 | 1.27424 | 0.279942 |
BABA 1h | 13.8501 | 3.45748 | 0.952502 | 0.256002 |
Chitin 1h | 13.8511 | 3.78774 | 0.976608 | 0.270832 |
Epi 1h | 10.4191 | 3.44362 | 0.740328 | 0.283326 |
SA 1h | 10.6842 | 3.23835 | 0.684632 | 0.229336 |
Me-JA 1h | 7.3185 | 3.30622 | 0.574998 | 0.286972 |
Control 6h | 28.3427 | 6.89358 | 1.83214 | 0.381479 |
ABA 6h | 6.00044 | 3.47937 | 0.385576 | 0.223387 |
ACC 6h | 18.1868 | 4.2065 | 1.05118 | 0.247363 |
BABA 6h | 18.9442 | 10.6046 | 0.852889 | 0.555084 |
Chitin 6h | 20.9966 | 5.25354 | 1.2426 | 0.403486 |
Epi 6h | 27.0703 | 8.06006 | 1.46894 | 0.673714 |
SA 6h | 15.8735 | 5.3968 | 0.98859 | 0.494619 |
Me-JA 6h | 17.7775 | 7.68558 | 0.967644 | 0.473006 |
Source Transcript PGSC0003DMT400037741 - Homology to Model Species (BLASTX to E-value < 1e-50)
Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
---|---|---|---|---|---|---|
Tomato (ITAG) | None | - | - | - | - | - |
TAIR PP10 | AT5G08720.1 | +2 | 0.0 | 553 | 284/401 (71%) | CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana protein match is: Polyketide cyclase / dehydrase and lipid transport protein (TAIR:AT4G01650.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:2841536-2845335 REVERSE LENGTH=719 |