The text files are in tab-delimited format and can be opened in Excel. To save on file sizes the eorna_expt_tpms.txt file has an experiment id column which relates to the experiment names in the eorna_expt_names.txt file. The meta-data spreadsheet has more details of the experiments.

Description	Download File
All TPM values from the EoRNA database (long list format)	eorna_expt_tpms.txt.gz (723 MB)
List of experiments names and relationship to experiment IDs in eorna_expt_tpms.txt.gz	eorna_expt_names.txt (33 KB)
Meta-data for the RNA-seq experiments included in EoRNA	metadata_barley_rnaseq.xlsx (342 KB)
All TPM values from the EoRNA database (in matrix format, one transcript per line)	eorna_expt_tpms_matrix.txt.gz (265 MB)

You can download the FASTA and GFF file for both the unpadded and padded (QUASI-ready) versions of the Barley Reference Transcript Dataset v1_0 here.

Description	Download File
Barley RTD FASTA file, padded for QUASI analysis	BaRT.1.0_Unsplit_exons_padded.fasta
Barley RTD GFF file, padded for QUASI analysis	BaRT.1.0_Unsplit_padded.gff
Barley RTD FASTA file, unpadded	BaRT.1.0_Unsplit_exons_unpadded.fasta
Barley RTD GFF file, unpadded	BaRT.1.0_Unsplit_unpadded.gff
Barley RTD protein translations	BaRT.1.0_transdecoder.pep.fasta
Barley RTD relationship to HORVU 2017 gene locations	Match-Overlap_All_BART_HORVU_wholeChrCoords.xlsx
Barley RTD Transcript Annotation (tab delimited). Best BLAST hit to Brachypodium, Rice and Arabidopsis predicted proteins.	BaRT.1.0_all_annotation.txt

Instructions on how to use these files in Go Enrichment Analysis can be found here.

Description	Download File
GO Annotation	BaRTv1_0_GO_annotation_withLookup.xlsx
BaRT_v_1_0.gmt for use in GO Enrichment	BaRT_v_1_0.gmt