- Probe CUST_8720_PI390587928
- Source Contig U35_14306
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_8720_PI390587928 | Hv_44K_v2 | GATGTTAGGGATATGGGTAAATTCTTTGATGAATCATTTGATTGTGCCCCCGTCCCGCTC | 247 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_1379.4 | 2883 | 2e-24 | 1437 - 1496 | 100 | 60 / 60 | plus | ABC05171 ABC05172 ABC30081 ABC30943 |
| MLOC | MLOC_1379.1 | 4383 | 2e-24 | 1543 - 1602 | 100 | 60 / 60 | plus | ABC05171 ABC05172 ABC05174 ABC30081 ABC30943 |
| MLOC | MLOC_1379.3 | 4109 | 2e-24 | 1359 - 1418 | 100 | 60 / 60 | plus | ABC05171 ABC05172 ABC05174 ABC30081 ABC30943 |
| MLOC | MLOC_1379.2 | 4030 | 2e-24 | 1280 - 1339 | 100 | 60 / 60 | plus | ABC05171 ABC05172 ABC05174 ABC30081 ABC30943 |
| MLOC | MLOC_1379.5 | 3198 | 2e-24 | 448 - 507 | 100 | 60 / 60 | plus | ABC05171 ABC05172 ABC05174 ABC16978 ABC30081 ABC30943 |
| MLOC | MLOC_1379.7 | 3455 | 2e-24 | 1337 - 1396 | 100 | 60 / 60 | plus | ABC05171 ABC05172 ABC05174 ABC30081 ABC30943 |
| MLOC | MLOC_1379.6 | 4187 | 2e-24 | 1437 - 1496 | 100 | 60 / 60 | plus | ABC05171 ABC05172 ABC05174 ABC30081 ABC30943 |
| MLOC | MLOC_26064.2 | 930 | 3e-21 | 755 - 814 | 97 | 58 / 60 | plus | ABC05171 |
| MLOC | MLOC_26064.1 | 1042 | 3e-21 | 836 - 895 | 97 | 58 / 60 | plus | ABC05171 |
| MLOC | MLOC_26063.1 | 1367 | 3e-21 | 836 - 895 | 97 | 58 / 60 | plus | ABC05171 ABC30943 |
| JLOC1 | JLOC1_852.1 | 2894 | 8e-25 | 1391 - 1450 | 100 | 60 / 60 | minus | |
| JLOC1 | JLOC1_851.2 | 3209 | 8e-25 | 456 - 515 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_851.1 | 4041 | 8e-25 | 1288 - 1347 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_17723.1 | 1277 | 2e-21 | 836 - 895 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC05171 | 858 | 3e-25 | 248 - 307 | 100 | 60 / 60 | plus | ABC05171 |
| Harvest35 | U35_14306 | 873 | 3e-25 | 248 - 307 | 100 | 60 / 60 | plus |
Contig Sequence (873 bp)
>U35_14306 873 Hv_44K_v2 GCTACATGGAGGAGGGCGGTGCGCCCTACGACTGCTACCAGCGCTACGCCGCGCTGCGCC CCTTCGTCCGCCGCTTTGTGCCTCCGGCCTACCGCCTCTTCATAATCGGATGCGGCTCCG CGCTTATGTCAGATGATATCGTCGCTTATGGCTACAATGTATCCTTAAATATTTTAATTT CCCTCTTTGTTCGGGAAGTGAAATCTAGTGTCTCTTGAGTTCCTTATGAGCTGTAGACAT GCAAACGGATGTTAGGGATATGGGTAAATTCTTTGATGAATCATTTGATTGTGCCCCCGT CCCGCTCGCACAGTTCAACGACACCCAGCTCCTCTCCGATTACAACTTGCTGGAGGAGAC GAGCCTAGTGAGGGAGTTGGCCCACAGGCTGCTCGGCGACTTCGGCGGCAACTTTGGCCG GAACTTCGAGGGATGCTCGGGTGCCAAGCTGCCGCCGTCGCTCGTCGCCCTCTGCAAGGC CGCGGAGCGCTGAAGCGTCCGGCTCTTCTTCCTCCCCCGCGGCATGACCAGGAGGGCGCA GAACCGCTCATGGCACGACAACAGGTGGCAATGACAAGAGCATATTGTGAAGAGGAAGAG GATGAGAAGAAACATGTGGTTCTCATCCAATCTTTGTGGAACTCTCTTTATGTGCGATTG TGCATTTATTGGGTCTTTTTTCTGTGCACTTGCACTTGCAGAAGTATCATGTTGTGTACA TGTAAAATTATTTTGATGTGCCCTTGTTAGGCGTTGAACCTTAATGTGTGGAGTCGATGG ATGATGTATTGTATTTGATGTGATATGCTACTGAAATGAAATATACATTTTACTTGAAAT GAAATATACATTTTACTTGCAAAAAAAAAAAAA
Homology of Contig U35_14306 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |