- Probe CUST_39493_PI390587928
- Source Contig U35_13932
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_39493_PI390587928 | Hv_44K_v2 | TCAGCCAGTACGGCGAGATCCTCGACGCCAAGATCATCAACGACCGTGAGACGGGGAGGT | 226 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK354142 | 908 | 2e-24 | 132 - 191 | 100 | 60 / 60 | plus | ABC00064 ABC00328 ABC00360 ABC00471 ABC00541 ABC17116 ABC37166 ABC46573 ABC53030 |
| MLOC | MLOC_59695.1 | 507 | 2e-24 | 119 - 178 | 100 | 60 / 60 | minus | ABC00064 ABC00328 ABC00471 ABC00541 ABC17116 ABC53030 |
| JLOC1 | JLOC1_38862.1 | 507 | 8e-25 | 330 - 389 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC53030 | 907 | 3e-25 | 136 - 195 | 100 | 60 / 60 | plus | ABC53030 |
| Harvest21 | ABC01009 | 495 | 3e-25 | 22 - 81 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00541 | 996 | 3e-25 | 205 - 264 | 100 | 60 / 60 | plus | ABC00541 |
| Harvest21 | ABC00116 | 1004 | 3e-25 | 207 - 266 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00064 | 770 | 3e-25 | 28 - 87 | 100 | 60 / 60 | plus | ABC00064 |
| Harvest35 | U35_37645 | 742 | 3e-25 | 167 - 226 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_13972 | 495 | 3e-25 | 22 - 81 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_13963 | 1052 | 3e-25 | 229 - 288 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_13932 | 665 | 3e-25 | 227 - 286 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_13906 | 474 | 3e-25 | 28 - 87 | 100 | 60 / 60 | plus |
Contig Sequence (665 bp)
>U35_13932 665 Hv_44K_v2 ACTAGTTCTAGATCGCTCTCGGGGTTGGCTTCTCCTCCCCTTCCGGTTCGGGTTCCTGGT TCGGTTCGGGTTCGGTTCGGTTCGGGTCCGAGAGACAGTAGCTAGCCTAGCCTAGGGTTT TCGTAGGAGGAGAAGGAGAGGAGGAGATCCATGGCGGAGACGGAGTACCGCTGCTTCGTG GGCGGCCTCGCCTGGGCCACCGACGACCACAACCTCCAGGCCGCCTTCAGCCAGTACGGC GAGATCCTCGACGCCAAGATCATCAACGACCGTGAGACGGGGAGGTCGCGCGGGTTCGGG TTCGTGACGTTCGGGAGCGAGGAGTCGATGCGCCAGGCCATCGAGGAGATGAACGGCAAG GAGCTCGACGGGCGCAGCATCACCGTCAACGAGGCCCAGTCCCGCCGCTCCGGCGGCGGG GGCGGCGGCGGCGGCGGCTACGGCGGCCAGCGCGGCGGTGGCGGAGGCTACGGCGGCGGT GGCGGCTACGGCGGCCAGGGAGGTGGCTACGGCGGCCAGGGAGGCGGTGGCTACGGCGGC CAGGGCGGTGGTGGCTACGGCGGCCAGCGCGGCGGCGGCGGCGGCTACGGCGGTGGCGGC GGTGGTTACGGCGGCGGCGGTGGCGGCTACGGCGGCCAGCGCGGCGGCGGCGACTCCGGC GGCCA
Homology of Contig U35_13932 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |