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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_3683_PI390587928Hv_44K_v2CCCAGATTTTGTATTTTTCTTGGATATTCTGTATCAAGTAAGTGTCTACCAGCTAACAAC736GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK3709078092e-24750 - 80910060 / 60plus ABC13024 ABC20255 ABC20943 ABC24039 ABC24268 ABC26250
JLOC1JLOC1_18885.14231e-22167 - 2269758 / 60plus
JLOC1JLOC1_20104.18822e-2137 - 979759 / 61plus
Harvest21ABC130248123e-25737 - 79610060 / 60plusABC13024
Harvest21ABC202555035e-23382 - 4419859 / 60plusABC20255
Harvest21ABC209437838e-21697 - 7549756 / 58plusABC20943
Harvest35U35_52678113e-25737 - 79610060 / 60plus
Harvest35U35_244545035e-23382 - 4419859 / 60plus
Harvest35U35_230707828e-21696 - 7539756 / 58plus



Contig Sequence (811 bp)

>U35_5267 811 Hv_44K_v2
GCCTAGACCCTCAGAACCCTCCCCTCGCTTCAATTTAGCCAGAGCTGCTCCCCTGCTCCT
ATGTGACAGTAGCGTCGCTGTCGGCGTTCGACACGATTCAGGAAGCCCGAGCCCCATCGT
TCTCCTCTCCCTACCCTGCTAGCCTCTCTGAAGCCCCAGGAACCCATTCCCGGTGTTGCC
TCGAGCCATTAGCACCGTAGGCCGAAGCTACGGTCGCTGGAGTTCCCAGGCCGCCGTGGA
CAGAGGGCACTCGCCCCCGAGCCCCTCCGCGACTCAGGTGCCTCCTGAGGATGGGGCTCT
CATCCTATAACTCGTCGGCGTGCTCAGCTCCGGGAGCAGAGCCCCTAGCGTTGACAAGCA
TCATCGGAACCGCCGTTGCTCCGTGTCTAGTGCACCTAGGAGGTAGAAGAGGAACCCAAC
AGGCGGGTCTCGCCTGTCGGCGAGCCAGCCCTGAGTGGTGCAGTTCCCCCTGGATTTTGA
AGAGAGCATACCTACTCCAAGATGTTGGGGTACACATCACCCTCCGCAAACTCCAAAGAT
TGCATTCGGAGAGGAGCACGATGCCGTCAACCCCGGAACCTAGGAGTCAAGGATAACAAC
TTTGTGAGATAGGAATTTATCCAAGTCAGCTGTTCCTGTGGGAACGGAGTCTCATGGACA
CTGGAGATTCCTCGAGTCTCTTCCGCCATCAACCTTAGACTTTTGTTCAACCTATTAGAC
CTTTATGGTCTTGTAACCCAGATTTTGTATTTTTCTTGGATATTCTGTATCAAGTAAGTG
TCTACCAGCTAACAACAAAAAAAAAAAAAAA



Homology of Contig U35_5267 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None