- Probe CUST_35179_PI390587928
- Source Contig U35_13963
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_35179_PI390587928 | Hv_44K_v2 | GGTGATCCTATGTTTGAACTCGGTTTGAATCGATGAAGAAAAATGCAAGTCATAGCTGCG | 942 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK368716 | 459 | 2e-24 | 400 - 459 | 100 | 60 / 60 | plus | ABC00064 ABC00360 ABC00471 ABC37166 ABC46573 ABC53030 |
| MLOC | MLOC_62076.1 | 1599 | 2e-24 | 1246 - 1305 | 100 | 60 / 60 | minus | ABC00064 ABC00360 ABC00471 ABC11723 ABC37166 ABC46307 ABC46573 ABC53030 |
| MLOC | MLOC_62076.2 | 1680 | 2e-24 | 1327 - 1386 | 100 | 60 / 60 | minus | ABC00064 ABC00360 ABC00471 ABC11723 ABC37166 ABC46307 ABC46573 ABC53030 |
| MLOC | AK354142 | 908 | 6e-24 | 850 - 908 | 100 | 59 / 59 | plus | ABC00064 ABC00328 ABC00360 ABC00471 ABC00541 ABC17116 ABC37166 ABC46573 ABC53030 |
| JLOC1 | JLOC1_40605.3 | 1747 | 8e-25 | 1394 - 1453 | 100 | 60 / 60 | minus | |
| JLOC1 | JLOC1_40605.2 | 1599 | 8e-25 | 1246 - 1305 | 100 | 60 / 60 | minus | |
| JLOC1 | JLOC1_40605.1 | 1680 | 8e-25 | 1327 - 1386 | 100 | 60 / 60 | minus | |
| Harvest21 | ABC46573 | 282 | 3e-25 | 18 - 77 | 100 | 60 / 60 | minus | ABC46573 |
| Harvest21 | ABC31270 | 503 | 3e-25 | 444 - 503 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00973 | 1168 | 3e-25 | 760 - 819 | 100 | 60 / 60 | minus | |
| Harvest21 | ABC00116 | 1004 | 3e-25 | 921 - 980 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC37166 | 175 | 1e-23 | 18 - 77 | 98 | 59 / 60 | minus | ABC37166 |
| Harvest21 | ABC00064 | 770 | 1e-23 | 694 - 753 | 98 | 59 / 60 | plus | ABC00064 |
| Harvest21 | ABC01009 | 495 | 2e-22 | 441 - 495 | 100 | 55 / 55 | plus | |
| Harvest21 | ABC00471 | 532 | 8e-21 | 465 - 516 | 100 | 52 / 52 | plus | ABC00471 |
| Harvest35 | U35_31126 | 503 | 3e-25 | 444 - 503 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_13963 | 1052 | 3e-25 | 943 - 1002 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_13972 | 495 | 2e-22 | 441 - 495 | 100 | 55 / 55 | plus | |
| Harvest35 | U35_13943 | 532 | 8e-21 | 465 - 516 | 100 | 52 / 52 | plus |
Contig Sequence (1052 bp)
>U35_13963 1052 Hv_44K_v2 TCGAGCACTGTTGGCCTACTGATCGCTCTCGGGGTTGGCTTCTCCTCCCCTTCCGGTTCG GGTTCCTGGTTCGGTTCGGGTTCGGTTCGGGTCCGAGAGACAGTAGCTAGCCTAGCCTAG GGTTTTCGTAGGAGAAGGAGAGGAGGAGATCCATGGCGGAGACGGAGTACCGCTGCTTCG TGGGCGGCCTCGCCTGGGCCACCGACGACCACAACCTCCAGGCCGCCTTCAGCCAGTACG GCGAGATCCTCGACGCCAAGATCATCAACGACCGTGAGACGGGGAGGTCGCGCGGGTTCG GGTTCGTGACGTTCGGGAGCGAGGAGTCGATGCGCCAGGCCATCGAGGAGATGAACGGCA AGGAGCTCGACGGGCGCAGCATCACCGTCAACGAGGCCCAGTCCCGCCGCTCCGGCGGCG GGGGCGGCGGCGGCGGCGGCTACGGCGGCCAGCGCGGCGGTGGCGGAGGCTACGGCGGCG GTGGCGGCTACGGCGGCCAGGGAGGTGGCTACGGCGGCCAGGGAGGCGGTGGCTACGGCG GCCAGGGCGGTGGTGGCTACGGCGGCCAGCGCGGCGGCGGCGGCGGCTACGGCGGTGGCG GCGGTGGTTACGGCGGCGGCGGTGGCGGCTACGGCGGCCAGCGCGGCGGCGGCGACTCCG GCGGCCAGTGGAGGTCCTGAGCGCCGGACCCCGTCTCATCGCCCAGTTATCCATCCATCT ATCGTCTACCGTCTTCGTCAGCAAGTTATCTATCTTCGGTGTGTCAGTCTGAGTCGTGTT TGTGTGTCTGTCCGGTCCTGTGGTGTTTTTGATCGCGAGCTCGAGTGGTCTCTGTGTTAC GCGAGGAAGAAACAACATGTCTTATCTTTCAGTCGGTCGGTCTGTCGTCGGTGATGCAGC AATCCCTCTTCCTGTCTTGGACTGTAATTGGGATGTGATGTTGGTGATCCTATGTTTGAA CTCGGTTTGAATCGATGAAGAAAAATGCAAGTCATAGCTGCGAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAATNGAAGAGGGGCCCGGTAC
Homology of Contig U35_13963 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |