- Probe CUST_35158_PI390587928
- Source Contig U35_13972
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_35158_PI390587928 | Hv_44K_v2 | ATGTTGGTGATCCTATGTTTGAACTCGGTTTGAATCGATGAAGAAAAATGCAAGTCATAG | 435 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK354142 | 908 | 2e-24 | 845 - 904 | 100 | 60 / 60 | plus | ABC00064 ABC00328 ABC00360 ABC00471 ABC00541 ABC17116 ABC37166 ABC46573 ABC53030 |
| MLOC | AK368716 | 459 | 2e-24 | 395 - 454 | 100 | 60 / 60 | plus | ABC00064 ABC00360 ABC00471 ABC37166 ABC46573 ABC53030 |
| MLOC | MLOC_62076.1 | 1599 | 2e-24 | 1251 - 1310 | 100 | 60 / 60 | minus | ABC00064 ABC00360 ABC00471 ABC11723 ABC37166 ABC46307 ABC46573 ABC53030 |
| MLOC | MLOC_62076.2 | 1680 | 2e-24 | 1332 - 1391 | 100 | 60 / 60 | minus | ABC00064 ABC00360 ABC00471 ABC11723 ABC37166 ABC46307 ABC46573 ABC53030 |
| JLOC1 | JLOC1_40605.3 | 1747 | 8e-25 | 1399 - 1458 | 100 | 60 / 60 | minus | |
| JLOC1 | JLOC1_40605.2 | 1599 | 8e-25 | 1251 - 1310 | 100 | 60 / 60 | minus | |
| JLOC1 | JLOC1_40605.1 | 1680 | 8e-25 | 1332 - 1391 | 100 | 60 / 60 | minus | |
| Harvest21 | ABC46573 | 282 | 3e-25 | 23 - 82 | 100 | 60 / 60 | minus | ABC46573 |
| Harvest21 | ABC31270 | 503 | 3e-25 | 439 - 498 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC01009 | 495 | 3e-25 | 436 - 495 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC00973 | 1168 | 3e-25 | 765 - 824 | 100 | 60 / 60 | minus | |
| Harvest21 | ABC00116 | 1004 | 3e-25 | 916 - 975 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC37166 | 175 | 1e-23 | 23 - 82 | 98 | 59 / 60 | minus | ABC37166 |
| Harvest21 | ABC00471 | 532 | 1e-23 | 460 - 516 | 100 | 57 / 57 | plus | ABC00471 |
| Harvest21 | ABC00064 | 770 | 1e-23 | 689 - 748 | 98 | 59 / 60 | plus | ABC00064 |
| Harvest21 | ABC53030 | 907 | 2e-21 | 840 - 898 | 97 | 58 / 60 | plus | ABC53030 |
| Harvest21 | ABC46781 | 202 | 8e-21 | 12 - 66 | 98 | 54 / 55 | minus | |
| Harvest35 | U35_31126 | 503 | 3e-25 | 439 - 498 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_13972 | 495 | 3e-25 | 436 - 495 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_13963 | 1052 | 3e-25 | 938 - 997 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_13943 | 532 | 1e-23 | 460 - 516 | 100 | 57 / 57 | plus | |
| Harvest35 | U35_46542 | 202 | 8e-21 | 12 - 66 | 98 | 54 / 55 | minus |
Contig Sequence (495 bp)
>U35_13972 495 Hv_44K_v2 GCACGAGGCTCCAGGCCGCCTTCAGCCAGTACGGCGAGATCCTCGACGCCAAGATCATCA ACGACCGTGAGACGGGGAGGTCGCGCGGGTTCGGGTTCGTGACGTTCGGGAGCGAGGAGT CGATGCGGAGGCTACGGCGGCGGCGGCGACTCCGGCGGCCAGTGGAGGTCCTGAGCGCCG GACCCCGTCTCATCGCCCAGTTATCCATCCATCCATCTATCGTCTACCGTCTTCGTCAGC AAGTTATCTATCTTCGGTGTGTCAGTCTGAGTCGTGTTTGTGTGTCTGTCCGGTCCTGTG GTGTTTTTGATCGCGAGCTCGAGTGGTCTCTGTGTTACGCGAGGAAGAAACAACATGTCT TATCTTTCAGTCGGTCGGTCTGTCGTCGGTGATGCAGCAATCCCTCTTCCTGTCTTGGAC TGTAATTGGGATGTGATGTTGGTGATCCTATGTTTGAACTCGGTTTGAATCGATGAAGAA AAATGCAAGTCATAG
Homology of Contig U35_13972 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |