- Probe CUST_31690_PI390587928
- Source Contig U35_17600
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_31690_PI390587928 | Hv_44K_v2 | CCACACATCTTACGGTCCTCTAATGGTTAATTTGATCTGGATTATGGAATCTTCAAAAAA | 864 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_80643.6 | 3493 | 3e-22 | 2374 - 2429 | 100 | 56 / 56 | plus | ABC07668 ABC07669 ABC17988 ABC29282 ABC47338 |
| MLOC | MLOC_80643.3 | 4085 | 3e-22 | 2472 - 2527 | 100 | 56 / 56 | plus | ABC07668 ABC07669 ABC17988 ABC29282 ABC47338 |
| MLOC | MLOC_76644.4 | 3775 | 3e-22 | 973 - 1028 | 100 | 56 / 56 | minus | ABC07668 ABC07669 ABC17988 ABC20754 ABC29282 ABC47338 |
| MLOC | MLOC_76644.2 | 3575 | 3e-22 | 974 - 1029 | 100 | 56 / 56 | minus | ABC07668 ABC07669 ABC17988 ABC20754 ABC29282 ABC47338 |
| MLOC | MLOC_76644.1 | 2856 | 3e-22 | 974 - 1029 | 100 | 56 / 56 | minus | ABC07668 ABC07669 ABC17988 ABC20754 ABC29282 ABC47338 |
| MLOC | MLOC_76644.3 | 3570 | 3e-22 | 974 - 1029 | 100 | 56 / 56 | minus | ABC07668 ABC07669 ABC17988 ABC20754 ABC29282 ABC47338 |
| MLOC | MLOC_76644.5 | 3679 | 3e-22 | 973 - 1028 | 100 | 56 / 56 | minus | ABC07668 ABC07669 ABC17988 ABC20754 ABC29282 ABC47338 |
| JLOC1 | JLOC1_53697.6 | 3384 | 1e-22 | 1915 - 1970 | 100 | 56 / 56 | plus | |
| JLOC1 | JLOC1_53697.5 | 3355 | 1e-22 | 1886 - 1941 | 100 | 56 / 56 | plus | |
| JLOC1 | JLOC1_53697.4 | 3296 | 1e-22 | 1827 - 1882 | 100 | 56 / 56 | plus | |
| JLOC1 | JLOC1_53697.3 | 3124 | 1e-22 | 1655 - 1710 | 100 | 56 / 56 | plus | |
| JLOC1 | JLOC1_53697.2 | 3144 | 1e-22 | 1675 - 1730 | 100 | 56 / 56 | plus | |
| JLOC1 | JLOC1_53697.1 | 3118 | 1e-22 | 1758 - 1813 | 100 | 56 / 56 | plus | |
| JLOC1 | JLOC1_51109.4 | 3255 | 1e-22 | 2273 - 2328 | 100 | 56 / 56 | plus | |
| JLOC1 | JLOC1_51109.3 | 3305 | 1e-22 | 2323 - 2378 | 100 | 56 / 56 | plus | |
| JLOC1 | JLOC1_51109.2 | 2728 | 1e-22 | 1746 - 1801 | 100 | 56 / 56 | plus | |
| JLOC1 | JLOC1_51109.1 | 3061 | 1e-22 | 2079 - 2134 | 100 | 56 / 56 | plus | |
| JLOC1 | JLOC1_51108.1 | 3606 | 1e-22 | 928 - 983 | 100 | 56 / 56 | minus | |
| Harvest35 | U35_17600 | 935 | 3e-25 | 865 - 924 | 100 | 60 / 60 | plus |
Contig Sequence (935 bp)
>U35_17600 935 Hv_44K_v2 CTGATATCTCCCAGCCAAGCAGGCTTATCCTATCCCCTCAATGTTTGATGCATCATTTAG CTGTTCATAGGCAGCTTCGTTTCCCCAAAGCAGAAGTTGAAACGAAGGTTTCTTGGTCAT TGCAGGTCCTAACTGACGATTTAGGTCCAACCTGATGATGAATTGAATTGCTGGATGTAG AAGGTTTGAAGGTTGCTACAGGGCATCAATCTAGACGGACCATCCTACAGCCGAAAAAAC CCAGTGCTCTCTATTTGATCTCTTGAAGAAGCTTCTGTTGTCTTAGCTGCCTTGTGCTTG TAGCATTGATTGTGTTTTTTTGCCTCCGCCTTCTTGTGGTTGCAGATTGTTTAGCCCAAG CTATGCTGGTAGCCATCAAAATATGTCGCATTTTTGGTTTCTGATCCTCTCCTGACTTCT ATAGTTGGGTAATGTTGATGGCTTGATACGCAGAAAGAGGTTAGGGATTATCGCTATATA TACTAAAAACAATGGAGAGTTGAAGCTTCTCGACTCGAAGCTTGAACAAACAGTTTGGCA TGGACACTACTACTCATCATGTCTTTGATTAGTGTCATTTCCACTGAATATGATTCCGAT GATCCCGACTTATTGGTATGGAATTGATTTTCAGAAGTGATGTTCTTACCATTGGTGGTT CTCCAGTGGGATCTGGATTACGAATCTTCAATGCATCTTCTTGGTTTGCTGGGGAACTTC CTATTTTAATTTGACAACTTTGTAAAATAGTTGGGCTAAGTTTGATGGTTTTACTGCTGA TTGTATACTTTCAACTCAAGTAGCTTGTACATATGTCAGTTTGTTTCGTTCTGCATTCGT CATGGATTTGAAGATACAAAGCCTCCACACATCTTACGGTCCTCTAATGGTTAATTTGAT CTGGATTATGGAATCTTCAAAAAAAAAAAAAAAAA
Homology of Contig U35_17600 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |