- Probe CUST_31687_PI390587928
- Source Contig U35_17603
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_31687_PI390587928 | Hv_44K_v2 | GGAGTCGATGGATGACGTATTGTAATTCATGTGATGTGCTACTGAAATGAAATATATACA | 503 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK370687 | 543 | 2e-24 | 469 - 528 | 100 | 60 / 60 | plus | ABC08513 ABC13191 ABC18776 ABC21257 ABC21343 ABC30713 |
| MLOC | AK251926.1 | 1428 | 7e-23 | 1332 - 1391 | 98 | 59 / 60 | plus | ABC01494 ABC01497 ABC05377 ABC08513 ABC13191 ABC16434 ABC18776 ABC21257 ABC30713 ABC38369 ABC40626 ABC46208 ABC47321 |
| JLOC1 | JLOC1_21884.1 | 507 | 4e-23 | 323 - 382 | 98 | 59 / 60 | plus | |
| JLOC1 | JLOC1_690.2 | 1098 | 4e-23 | 1025 - 1084 | 98 | 59 / 60 | plus | |
| JLOC1 | JLOC1_690.1 | 1076 | 4e-23 | 1003 - 1062 | 98 | 59 / 60 | plus | |
| Harvest21 | ABC08514 | 546 | 3e-25 | 455 - 514 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC08513 | 581 | 3e-25 | 490 - 549 | 100 | 60 / 60 | plus | ABC08513 |
| Harvest21 | ABC18776 | 612 | 1e-23 | 527 - 586 | 98 | 59 / 60 | plus | ABC18776 |
| Harvest21 | ABC16434 | 1223 | 8e-21 | 1129 - 1186 | 97 | 56 / 58 | plus | ABC16434 |
| Harvest35 | U35_17604 | 581 | 3e-25 | 490 - 549 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_17603 | 596 | 3e-25 | 504 - 563 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_9650 | 612 | 1e-23 | 527 - 586 | 98 | 59 / 60 | plus | |
| Harvest35 | U35_7855 | 1223 | 8e-21 | 1129 - 1186 | 97 | 56 / 58 | plus |
Contig Sequence (596 bp)
>U35_17603 596 Hv_44K_v2 CACGCGTCCGCTTCAACTTCCCACGTCTCCTGCCGCCAGCCTTCCTTCCCCTCAACAGAC CCCCTGTGCTCTCGTCTGCCACGACAGGACCCTGCGTCCCTTCTCCACCTCTCCCTTCAA CTTCCCACGCACGATCCCCTGTGCCCCAAGGAGAACGATGACAAGGCGGCGACAATCATC ACCGGGATCTGTCGCCCGCGCCGCCGCAAGAAGATCTACCATGCTGTCTCCATTCCGGGA TCTGTCGCTCGCGCCGCCGCGTGCCTGCCCTCTTTGCCGCCGCCGTCGTCCATTGCCGCG GACGCCTCCTCCTCACTGGTGAGATGGATGATCAGAAGCACCCATAAGAAGTAGAGGACA TGACAGGAGGAGGGAACAGGAAGCTTTGTTTATCATTGATGTTATGTGTGATCAACAAAA ACTTGTGCTTCTCATCCAATCTTTGTCAAACTATGTTGATGTGTGATTATGCATTTGTTG GGCCTTGAACCTTTATGTGTAGAGGAGTCGATGGATGACGTATTGTAATTCATGTGATGT GCTACTGAAATGAAATATATACAACTAATTTGCAGTCTTAAAAAAAAAAAAAAAAA
Homology of Contig U35_17603 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |