- Probe ABC16434
- Source Contig ABC16434
Affymetrix Source Sequence (1223 bp)
>ABC16434 1223 TAGACATATTAGTTGCGCGACATTTTTCTAACCCTAGGTAGCTATGTAGAGTTGTGGGAT TGCACCACTCGTCAGAAGGGTGGTGTCCTGGTGCGTGCAGCAAAATAGCCGTGTGTCGCA CGCCAACAGCATGGACAACTTTAATACTCACATGGATACCTATGTCTGTAATAGCAGATG GAAGGTGTTCTTAATTTGGGGATCAAGGCCAAAAATAATTGCACACAGAACTATAAAAGT ACTTAAATATTAGTCGAACCGTTCGTGGAGCTGAATTAGCATCTTTTGGTATTTACCATT TGATGATTTCATCACTGTGAAGGCAATAGGACATTGGAACATGATTACCGACTACGGGAT CCGTAACCAAATATATTACCATCAAAGTGCAATACTGCAGATTTTACCATATTTCTAATG CACGATCGTCATCACGCATATCTCTCAGTATGCGACTTAGCTCTGCAGCGCCCGACCATC ATGCGCCGATGTGTATCTAGCATTTCGATGACAAGAGATGACAAAGATTTTGAAGGTATT TTTTCTAACATTTTCTATGAAATACTATCTGACGACATATGCAGTTCATGTAGACCATAG AAATATTCCTTTTTAGGGAGAAATACTATCTGACAACATATGCAATTCATGTAGAACATA TAAATATTGTCATGTACTGCAGGTGATAGTAATTGACATGATGATAGAAATATTGTCGTT ATACACTATTTTTTTGACAGTCTTAAACGTTCAAAATATTTCAGTATCTGTTATTCTTAT TTTCTAGCCCGTGTAGATGCATGGGTTGGCGACTAGTAGTTCTAATTTATTTATTACTTG TACATTATAATATTTGATTATTTTGTATGCTTTCTTATGTTTGATTATTTGAATTACCAG GATGATTTGAAGCACCCAAAAGAAGTAAAGGACAGGTCAGGAGGGAACAAGAAGCTTCGT TTATCATTGATGTTATGTGTGATCAATAAAAACTTCTGCTTTTCATCCAATCTTTGTCGA ACTATGTTGATGTGTGATTATGCACTTGTTGGGCCTTTTTACTGTGCACCTGCACTTGTA GAACTATTTTGTTGTGCACTTGTTGGGCCTTAAATCTTTATGTGTAGAGGAGTCGATAGA TGATGTATTGTAATTCATGTGATGTGCTACTGAAATGAAATATATATAACTAATTTGCAG TTTTTTAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_45414.1 | 1106 | 0.0 | 324 - 1106 | 99 | 776 / 783 | CUST_12385_PI390587928 | ABC16434 |
| MLOC_75318.1 | 399 | 2e-152 | 32 - 399 | 93 | 343 / 368 | CUST_21288_PI390587928 CUST_35249_PI390587928 | ABC05377 ABC08513 ABC13191 ABC16434 ABC18776 ABC21257 ABC30713 ABC38369 ABC40626 ABC47321 |
| AK249808.1 | 1004 | 1e-118 | 649 - 954 | 92 | 282 / 306 | None | ABC05377 ABC08513 ABC13191 ABC16434 ABC18776 ABC21257 ABC30713 ABC38369 ABC40626 ABC46208 |
| AK251926.1 | 1428 | 8e-106 | 1101 - 1421 | 89 | 288 / 325 | CUST_31687_PI390587928 CUST_31686_PI390587928 CUST_1960_PI390587928 CUST_35249_PI390587928 CUST_19680_PI390587928 | ABC01494 ABC01497 ABC05377 ABC08513 ABC13191 ABC16434 ABC18776 ABC21257 ABC30713 ABC38369 ABC40626 ABC46208 ABC47321 |
| AK375894 | 999 | 1e-103 | 716 - 999 | 91 | 259 / 285 | CUST_35249_PI390587928 CUST_19680_PI390587928 | ABC05377 ABC16434 ABC18776 ABC21257 ABC30713 ABC38369 ABC40626 ABC47321 |
| AK249969.1 | 1057 | 5e-103 | 731 - 1054 | 88 | 287 / 327 | None | ABC05377 ABC13191 ABC16434 ABC18776 ABC38369 ABC40626 |
| AK359875 | 1896 | 6e-87 | 1603 - 1809 | 95 | 197 / 207 | CUST_35249_PI390587928 | ABC05377 ABC08513 ABC13191 ABC16434 ABC18776 ABC21257 ABC24067 ABC30713 ABC40626 ABC46208 |
| MLOC_31364.1 | 304 | 6e-82 | 1 - 220 | 92 | 204 / 222 | None | ABC16434 ABC18776 |
| MLOC_76565.8 | 951 | 2e-81 | 735 - 951 | 92 | 202 / 219 | None | ABC13191 ABC16434 ABC18776 ABC21257 ABC30713 |
| AK373908 | 607 | 1e-58 | 450 - 603 | 94 | 144 / 154 | CUST_21288_PI390587928 CUST_35249_PI390587928 | ABC01494 ABC13191 ABC16434 ABC18776 ABC21257 ABC38369 |
| AK249443.1 | 720 | 5e-58 | 568 - 720 | 93 | 143 / 153 | CUST_21288_PI390587928 CUST_35249_PI390587928 | ABC01494 ABC13191 ABC16434 ABC18776 ABC21257 ABC38369 |