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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_19680_PI390587928Hv_44K_v2AGAGGAGTCGATGGATGATGTATTGTAATTCATGTGATGTGCTACCGAAATGAAATATAT-1GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK251926.114287e-231329 - 13889859 / 60plus ABC01494 ABC01497 ABC05377 ABC08513 ABC13191 ABC16434 ABC18776 ABC21257 ABC30713 ABC38369 ABC40626 ABC46208 ABC47321
MLOCAK3758949993e-21934 - 9939758 / 60plus ABC05377 ABC16434 ABC18776 ABC21257 ABC30713 ABC38369 ABC40626 ABC47321
JLOC1JLOC1_21884.15074e-23320 - 3799859 / 60plus
JLOC1JLOC1_690.210984e-231022 - 10819859 / 60plus
JLOC1JLOC1_690.110764e-231000 - 10599859 / 60plus
JLOC1JLOC1_27294.12992e-21227 - 2869758 / 60plus
JLOC1JLOC1_266.88782e-21812 - 8719758 / 60plus
JLOC1JLOC1_266.717752e-211709 - 17689758 / 60plus
JLOC1JLOC1_266.617892e-211723 - 17829758 / 60plus
JLOC1JLOC1_266.515382e-211472 - 15319758 / 60plus
JLOC1JLOC1_266.48652e-21799 - 8589758 / 60plus
JLOC1JLOC1_266.317712e-211705 - 17649758 / 60plus
JLOC1JLOC1_266.224522e-212386 - 24459758 / 60plus
JLOC1JLOC1_266.18622e-21796 - 8559758 / 60plus
JLOC1JLOC1_27184.12276e-21169 - 2279757 / 59plus
Harvest21ABC187766121e-23524 - 5839859 / 60plusABC18776
Harvest21ABC212575416e-22439 - 4989758 / 60plusABC21257
Harvest21ABC1643412236e-221126 - 11859758 / 60plusABC16434
Harvest21ABC109478556e-22761 - 8209758 / 60plusABC10947
Harvest35U35_387966741e-2343 - 1039860 / 61minus
Harvest35U35_96506121e-23524 - 5839859 / 60plus
Harvest35U35_192259106e-22808 - 8679758 / 60plus
Harvest35U35_785512236e-221126 - 11859758 / 60plus
Harvest35U35_193822126e-222118 - 21779758 / 60plus



Contig Sequence (674 bp)

>U35_38796 674 Hv_44K_v2
TTTTTTTTTTTTTTTTTAAGTACAAGATTGCAAATTAGTTGTATATATTTNCATTTCGGT
AGCACATCACATGAATTACAATACATCATCCATCGACTCCTCTACACATAAAGGTTCAAG
GCCCAACAGGTGCACAACAAAATAGTTCTACAAGTGCAGGTGTACACCAAAAGGACCCAA
CAAGTGCATAATCACACATCAACATAGTTCGACAAAGATTGGATGAGAAGCACATGTTTT
TGTTGATCAAACATAACATCAATGATAAACGAAGCTTCTTGTTCCCTCCTCCTGTTCTGT
CCTCTACTTCTTCTGGGTGCTTCAGGTCTTCCTTTGCCTTTAGTTCTTGGTTATCTGCCA
TGACCCAGCATTCGTCCTTGTCAAGTACAAAGGGCTCATCCTTCTCATCAGTAGAGACCA
TCTCATAGCCTTGCACGGCAGCCAGTCGCCGGACAATTAAATCATCGGATTTCTCTGGGT
CCTTCAACAAGTAGTTGTGTGACTAATGCTAAGATTCCTTGGGAATCAGGCCAATATGGA
CACAACCCCAAGGATACAGATNCAGCTATTTTCTTGTTGAGTGGGAGTAAGTGTGACCGG
CGACGAAACCGAATGGTATCGAGGTGTTGAACCACCTTGCCGCGAGTTGACAGTTGACTG
CAGTTTTTTGCTCA



Homology of Contig U35_38796 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None