- Probe CUST_18617_PI390587928
- Source Contig U35_6820
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_18617_PI390587928 | Hv_44K_v2 | TGATGGAATATGATGTCATCTTTTGGTCCGAATCAAGAAAATGCTAGAAGTCTCAAACAA | 1082 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK250402.1 | 6765 | 2e-24 | 6474 - 6533 | 100 | 60 / 60 | plus | ABC07669 ABC17988 ABC20754 ABC34305 ABC38921 |
| MLOC | MLOC_67568.1 | 8628 | 2e-24 | 1971 - 2030 | 100 | 60 / 60 | minus | ABC07669 ABC17988 ABC20754 ABC30471 ABC34305 ABC38921 |
| MLOC | MLOC_67568.4 | 6839 | 2e-24 | 410 - 469 | 100 | 60 / 60 | minus | ABC07669 ABC17988 ABC20754 ABC34305 ABC38921 |
| MLOC | MLOC_67568.2 | 8046 | 2e-24 | 1965 - 2024 | 100 | 60 / 60 | minus | ABC07669 ABC17988 ABC20754 ABC30471 ABC34305 ABC38921 |
| MLOC | MLOC_67568.3 | 8388 | 2e-24 | 1955 - 2014 | 100 | 60 / 60 | minus | ABC07669 ABC17988 ABC20754 ABC30471 ABC34305 ABC38921 |
| JLOC1 | JLOC1_44630.10 | 8006 | 8e-25 | 4745 - 4804 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_44629.2 | 9904 | 8e-25 | 3203 - 3262 | 100 | 60 / 60 | minus | |
| JLOC1 | JLOC1_44629.1 | 8563 | 8e-25 | 3203 - 3262 | 100 | 60 / 60 | minus | |
| JLOC1 | JLOC1_44630.8 | 9333 | 8e-25 | 6072 - 6131 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_44630.5 | 6818 | 8e-25 | 3557 - 3616 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_44630.4 | 9550 | 8e-25 | 6289 - 6348 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_44630.3 | 8548 | 8e-25 | 5287 - 5346 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_44630.1 | 7324 | 8e-25 | 4063 - 4122 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC21648 | 665 | 3e-25 | 164 - 223 | 100 | 60 / 60 | minus | |
| Harvest35 | U35_6820 | 1390 | 3e-25 | 1083 - 1142 | 100 | 60 / 60 | plus |
Contig Sequence (1390 bp)
>U35_6820 1390 Hv_44K_v2 GGGTATATGCGCCTTTAGAGACAAACCAGCGGAGATTGTATTGGCTGTTCCCTTTAGCTC ATCAGATGATATCTTAAGTTCAGGATCGGAGTTGTTGGTCAGGCCTGCACGGTTGAGGAT TCAAATGTGTCTCGAAGCGTGACTGAACTGTCTGGATATATTCTCCTCCTATTTGATATC TCCATGTGAGCAGTTCCGTTTCTGTTCCAAGCATATTTGATATTTGGTTGTTCTCCAACA TTTTAGAGTAAGGCTTGCGTGGACAAAATGATACAGAGGAGCTTTAGGAGATTCTTCTTG AGTCGATCTTGTCAAACTTCTCTTTGGTAACTTTTATACATTCCAAACATTGTTCTTCTC TTGTTAGTACTATACAGCGACAATAATTCAAACCAATGTGCATAACTTAACTAAATGTCT AAGATGTCGAGCAGCTTTCTCCAAACTGGCTAGGTCTTTTATTCATTGCAGGTCTACTTG ACAATTTTATTTGAGGTCATGCTGCGTGAAAAATCTGTTTAGAGACCTTATTTCACATTT TCTATTCCGTTAGAGAACCAATTACCTGAGCTGTTAAGTTTGAGTATTCTAACTGATCCG CAGAAGTGGAGAGTTCTAAAGGCTAGTTTGGAAGCTTCGTTCTGGATGAAGGAGTCCTCT ACAACCACATAATCTTACACTTAGATTCCATACTTATTTCCACTCATTGCCAAGATTTCA TTATGGACTTTCGTTGAAGAAATATTAAGTATGACGACTATATTTTGAGCTGTTCATTGA TTTGCAGTGGTGGAAGTTTTATTGCAAGATTGTAGAGTTGGAAATTCGGCTAGTGCGGGG ACTTGCTGAAGCTATCAAATTGGTTTGGACTTCTGATTAGTGATACTGAAGCATATTACG TTATTTGGTCTTTGTGGTAGTTTTCAATTTGAACTTGCACTCGGTGGCCTCATCTCTTTG GCGCAGCTTGGAGTTGGTAGTGTGCACATCTGATTCTTTCAACTGTCATGAAGCATCTTA CTTGGTTTCTGTTGTGTGACATCTTGCTGATTATGGTATCTGCTTCAACTTGCATGTGGT TTTGATGGAATATGATGTCATCTTTTGGTCCGAATCAAGAAAATGCTAGAAGTCTCAAAC AAGGGTCCGGAATGGAAATATCAGTTCATACTCAGTTTGTATAGCAGATTATCAAATTTT GATTTGGCTATAAATTACTTGGTTACCATACTGTTTCAGGAAGTTAGGCTTTGACATTTG GCTGCTTGTATCTTTGAACTTGCAAATTTATCACCTATGATAGGAAGTAAAGATCGCATG TACATGAGCTCTGAATGCAGTAAAAATGTTCATACATTTATATATGAATTGTCAAAAAAA AAAAAAAAAA
Homology of Contig U35_6820 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |