barSeed - Barley Seed Development Database

Probe ABC53014

Source Contig ABC53014

barSeed

Links

Affymetrix Source Sequence (764 bp)

>ABC53014 764
AACACCTTCCGTCCGAACAACTAGCAGCACCTGTAGTAGCAATCATCTTTACCCTGTTGC
AGCATCTGTAGCTTTTTTCTGCTCTTTCGTGCACCTTTCGTGCACCTTCCATCCGCAGCT
TGATTAATGGCGACCATGATGGCCATGAGCTCCTTCGCCGGTGCGGCCGTCTTGCCGCGC
GGCTCGGCCCGGTCTCTGCCAGCGCTGGGCCGACGTACCCTCGTCGTCAGGGCACAGACC
GAGGGCCCGAACGCACCACCGCCAAACAAACCCAAGGCGAGCACCTCCATCTGGGACGCG
ATGGCGTTCAGCGGCCCTGCGCCGGAGCGCATCAACGGGCGGCTAGCCATGGTGGGCTTC
GTGACGGCGCTGGCTGTGGAGGCAGGCCGCGGCGACGGGCTCCTCTCGCAGCTCGGCAGC
GGCACCGGGCAGGCGTGGTTCGCCTACACCGTGGCGATGCTGTCCATGGCGTCGCTGGTG
CCGCTGCTCCAGGGCGAGAGCGCCGAGGGCAGAGCCGGCGCCATCATGAACGCCAACGCG
GAGCTCTGGAACGGCCGCTTCGCCATGATCGGACTCGTCGCGCTCGCCGCCACCGAGATC
ATCACCGGCACCCCCTTCATCAACGTGTAGAAGAAAATAGCTTTGCTGTCGACCGGATAA
CACAACCTGTACTTAGCTAGTAGGACATGTAAATGATCCAGAATTGATCATTCTCGTATT
CTTTGTAGTATTGCTGATAAAGACGGTTATCTTTCTCTTTTTCT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK373058	756	0.0	6 - 755	98	747 / 765	CUST_10085_PI390587928 CUST_9976_PI390587928	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
AK360435	763	0.0	31 - 734	92	658 / 718	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
AK357456	747	0.0	25 - 715	92	645 / 702	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
AK360125	910	0.0	63 - 757	88	627 / 709	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
AK248248.1	784	0.0	93 - 727	88	570 / 649	CUST_9979_PI390587928	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
AK360770	808	0.0	83 - 698	88	548 / 622	None	ABC03423 ABC03426 ABC03429 ABC03431 ABC03433 ABC53014
AK367491	760	0.0	66 - 759	86	603 / 701	CUST_9972_PI390587928	ABC03423 ABC03427 ABC03429 ABC03430 ABC03431 ABC03433 ABC53014
AK358564	931	0.0	380 - 838	92	425 / 460	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
MLOC_25784.1	771	0.0	241 - 767	89	473 / 529	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
MLOC_78997.1	800	0.0	74 - 633	88	493 / 562	CUST_9979_PI390587928	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
AK356679	660	2e-95	409 - 628	95	211 / 221	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
MLOC_43422.1	373	6e-115	111 - 373	95	262 / 277	CUST_9976_PI390587928	ABC53014
MLOC_26864.1	341	5e-101	1 - 233	95	223 / 234	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
MLOC_72558.1	309	2e-75	115 - 309	93	183 / 196	None	ABC03431 ABC53014
MLOC_19484.1	526	6e-75	1 - 302	84	259 / 307	None	ABC03431 ABC03433 ABC53014
MLOC_30682.1	307	1e-72	1 - 279	85	249 / 292	None	ABC03423 ABC03431 ABC03433 ABC53014