barSeed - Barley Seed Development Database

Probe ABC03431

Source Contig ABC03431

barSeed

Links

Affymetrix Source Sequence (701 bp)

>ABC03431 701
CGTGCACCTTCCATCCACATGCTGATCAATGGCGACCATGATGTCCATGAGCTCCTTCGC
CGGTGCGGCCGTCGTGCCGCGCAGCTCGGCCAGCAGCTTCGGCGCCCGGTCTCTGCCAGC
GCTGGGCCGACGCACCCTCGTCGTCAGGGCACAGACCGAGGGCCCGAACGCACCACCGCC
AAACAAACCCAAGGCGACCACCTCGATCTGGGACGCGATGGCGTTCAGCGGCCCTGCGCC
GGAGCGCATCAACGGGCGCCTTGCCATGGTGGGCTTCGTGACGGCGCTGGCGGTGGAGGC
AGGCCGCGGCGACGGGCTCCTCTCGCAGCTCGGCAGCGGCACCGGACAGGCGTGGTTCGC
CTACACCGTGGCGGTGCTGTCCATGGCGTCGCTGGTGCCGTTGCTTCAGGGCGAGAGCGC
CGAGGGCAGAGCCGGCGCCATCATGAACGCCAACGCGGAGCTCTGGAACGGCCGCTTCGC
CATGCTCGGACTCGTCGCGCTCGCCGCCACCGAGATCATCACCGGCGCGCCCTTCATCAA
CGTGTAGAATAAAATAGCTTCGCTGTCGACCGGATAACACAACATGTACTTAGCTAGTAG
GACATGTACGTAAATGGTCAGAACTGATCATGCTCGTATTCTTTGTAGTATTGCTACTAA
TTAAAGACGGAGTCCCGCTTCGGTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK360435	763	0.0	81 - 763	97	663 / 684	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
AK357456	747	0.0	99 - 705	97	591 / 608	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
AK373058	756	0.0	91 - 737	93	621 / 670	CUST_10085_PI390587928 CUST_9976_PI390587928	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
AK360125	910	0.0	104 - 768	90	608 / 673	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
AK360770	808	0.0	104 - 687	90	533 / 589	None	ABC03423 ABC03426 ABC03429 ABC03431 ABC03433 ABC53014
AK367491	760	0.0	85 - 742	88	580 / 660	CUST_9972_PI390587928	ABC03423 ABC03427 ABC03429 ABC03430 ABC03431 ABC03433 ABC53014
AK248248.1	784	0.0	114 - 746	88	572 / 648	CUST_9979_PI390587928	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
MLOC_25784.1	771	0.0	262 - 771	92	471 / 511	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
MLOC_78997.1	800	0.0	95 - 633	91	488 / 539	CUST_9979_PI390587928	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
AK358564	931	3e-67	104 - 296	91	176 / 194	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
AK356679	660	1e-96	412 - 618	98	202 / 207	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
MLOC_72558.1	309	1e-111	85 - 309	99	223 / 225	None	ABC03431 ABC53014
MLOC_26864.1	341	3e-102	1 - 223	97	216 / 223	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
MLOC_30682.1	307	7e-94	1 - 232	94	218 / 233	None	ABC03423 ABC03431 ABC03433 ABC53014
MLOC_19484.1	526	7e-89	1 - 283	88	249 / 284	None	ABC03431 ABC03433 ABC53014
MLOC_8602.1	583	3e-88	392 - 583	97	188 / 193	None	ABC03431
MLOC_3988.1	304	7e-69	92 - 287	91	179 / 197	None	ABC03431 ABC03433