barSeed - Barley Seed Development Database

Probe ABC03423

Source Contig ABC03423

barSeed

Links

Affymetrix Source Sequence (661 bp)

>ABC03423 661
CAACAAACAGCAAGTAGCAATCATCTAGTTGCAGCATCTGTAGCTTCCTTTTCTTCTTCG
TCTACCTTCCGCGGCTAGCTGATTAATAGCAACCATGATGACCACGAGCTCCTTCGCCGG
TGCCGCCGTCCTGCCGCGTGGCTCGGCCGGTCACTTCGGTGTCCAGTCTATGCCTGCGCT
GGCCCGTCGCGCCCTCGTCGTCAGGGCACAAACCGAAGGCCCGAGCTCACCACAGCCAAG
CAAACCCAAGGCGAGCACCTCGATCTGGGACGCGCTGGCGTTCGCCGGCCCAGCGCCGGA
GCGCATCAACGGGCGCCTTGCCATGGTAGGCTTCGTGACGGCGCTCGCTGTGGAGGCAGG
GCGCGGTGATGGGCTTCTCTCGCAGCTCGGCAGCGGCACCGGGCAGGCGTGGTTCGCCTA
CTCCGTGGCCGTGCTGTCCGTGGCGTCGCTGGTGCCGCTGCTCCAGGGCGAGAGCGCCGA
GGGCAGAGCCGGCGCCATCATGAACGCCAACGCGGAGCTCTGGAACGGCCGCTTCGCCAT
GCTCGGACTCGTCGCTCTGGCAGCCACCGAGATCATCACCGGCGCACCCTTCATCAACGT
GTAAAACTAGCTCTTTTCTCGACACGTGTACTTAGCTAGTAGGCCCATGTAAATGATGAG
A

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK360770	808	0.0	27 - 698	96	643 / 673	None	ABC03423 ABC03426 ABC03429 ABC03431 ABC03433 ABC53014
MLOC_25784.1	771	0.0	185 - 769	97	570 / 585	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
AK248248.1	784	0.0	71 - 650	94	545 / 580	CUST_9979_PI390587928	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
MLOC_78997.1	800	0.0	18 - 635	91	565 / 618	CUST_9979_PI390587928	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
AK360125	910	0.0	72 - 663	90	534 / 594	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
AK357456	747	0.0	63 - 643	90	528 / 585	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
AK360435	763	0.0	49 - 625	89	518 / 580	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
AK373058	756	0.0	59 - 620	88	512 / 580	CUST_10085_PI390587928 CUST_9976_PI390587928	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
AK367491	760	0.0	4 - 637	86	548 / 639	CUST_9972_PI390587928	ABC03423 ABC03427 ABC03429 ABC03430 ABC03431 ABC03433 ABC53014
AK358564	931	2e-159	380 - 744	95	345 / 365	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
MLOC_31441.1	427	2e-139	1 - 353	92	325 / 353	None	ABC03423 ABC03429 ABC03433
AK356679	660	2e-65	409 - 556	97	144 / 148	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
MLOC_26864.1	341	4e-71	1 - 161	97	156 / 161	None	ABC03423 ABC03429 ABC03431 ABC03433 ABC53014
MLOC_30682.1	307	9e-63	1 - 264	84	224 / 268	None	ABC03423 ABC03431 ABC03433 ABC53014