- Probe ABC49808
- Source Contig ABC49808
Affymetrix Source Sequence (703 bp)
>ABC49808 703 GTTATACAAGCTCATCATGTTCTTGGAAGGGAATTTCTTTTCATTTTGGGTGCTTAACAT TTTGCATGTTTGATGGATGTTTACTCCTTTGGTATAATATGGTTACCTGAATCTCCCGTA CTAGACTACCAGTGGTGTAGATTTTTGATATTGAGGTTCAGAAAATTAACTTTGGTTAGC TAACTTATGGAGGGTTGTTTTTGGAGGAAAAGAAGACAAAGATCGACGGATCACCGCATA CAGCCTGCTAGATAGCACAGCTGGGACAAACCTGATGATGAACATCACTATTTTCCTGAG AAGGATCCAGCGTGTTGAACCGAAAAAAAGATGGTACTATAATTGGCCAGTGACTAAGTT GTACCATTCCTTGAACAAACTTATATTCGCTCGCGATAAGATGTCTATGGCTCATCTACA AGATGGGAACAAAAGGAACAGCTTCAGCATAGTATGCTATCTTAACTGCCACTGCACCTA TCAAGCATATAAACTAATTTGAAGAATGCAGGCCACTGAAAAATTAAGCCTCTGTAACAT AGGGAGTCTCAGTGATGAACCTTTGTGTGTTCTCGATTTTTATTTTGAGAGTGTTGTTTA TTTGAAATGACAGTGGAGTTCTTGCTCCTCCCCATTCCCAAACTCCTCATGTAACTGTAT GCTACTCTCTGTAACTGCTTGATGCTGTATAATATATGTTCAG
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_32246.3 | 725 | 0.0 | 1 - 657 | 94 | 617 / 658 | None | ABC40829 ABC49808 |
| MLOC_32245.1 | 527 | 0.0 | 1 - 524 | 96 | 504 / 525 | None | ABC40829 ABC49808 |
| AK354961 | 1959 | 0.0 | 1467 - 1952 | 96 | 472 / 494 | CUST_34416_PI390587928 CUST_26904_PI390587928 CUST_20963_PI390587928 | ABC07126 ABC39121 ABC40829 ABC41063 ABC49808 |
| MLOC_49524.2 | 1357 | 0.0 | 98 - 499 | 99 | 401 / 403 | None | ABC40829 ABC49808 |
| MLOC_49524.1 | 523 | 0.0 | 101 - 502 | 99 | 401 / 403 | None | ABC40829 ABC49808 |
| MLOC_49524.5 | 1208 | 0.0 | 83 - 484 | 99 | 401 / 403 | None | ABC40829 ABC49808 |
| MLOC_49524.6 | 1553 | 0.0 | 83 - 484 | 99 | 401 / 403 | None | ABC40829 ABC49808 |
| MLOC_49524.3 | 1516 | 0.0 | 83 - 484 | 99 | 401 / 403 | None | ABC40829 ABC49808 |
| MLOC_49524.4 | 1490 | 0.0 | 83 - 484 | 99 | 401 / 403 | None | ABC40829 ABC49808 |
| MLOC_49524.7 | 1384 | 0.0 | 70 - 471 | 99 | 401 / 403 | None | ABC40829 ABC49808 |
| MLOC_32246.1 | 2044 | 7e-139 | 502 - 805 | 96 | 292 / 304 | None | ABC40829 ABC49808 |
| MLOC_32246.2 | 1791 | 7e-139 | 442 - 745 | 96 | 292 / 304 | None | ABC40829 ABC49808 |
| MLOC_79912.2 | 280 | 7e-119 | 12 - 280 | 96 | 257 / 269 | None | ABC40829 ABC49808 |
| MLOC_79912.1 | 629 | 1e-116 | 365 - 629 | 95 | 253 / 265 | None | ABC40829 ABC49808 |
| MLOC_35907.1 | 225 | 9e-88 | 26 - 225 | 96 | 193 / 201 | None | ABC49808 |
| MLOC_46791.1 | 340 | 9e-83 | 1 - 180 | 98 | 176 / 180 | None | ABC40829 ABC49808 |
| MLOC_5617.4 | 2131 | 2e-79 | 8 - 192 | 96 | 178 / 186 | None | ABC40829 ABC49808 |
| MLOC_5617.2 | 2704 | 2e-79 | 37 - 221 | 96 | 178 / 186 | None | ABC40829 ABC49808 |
| MLOC_5617.3 | 3471 | 4e-66 | 674 - 862 | 91 | 172 / 189 | None | ABC40829 ABC49808 |
| MLOC_35567.2 | 955 | 3e-67 | 814 - 955 | 99 | 141 / 142 | None | ABC49808 |
| MLOC_35567.1 | 1095 | 4e-66 | 956 - 1095 | 99 | 139 / 140 | None | ABC49808 |
| MLOC_5617.5 | 3048 | 4e-66 | 513 - 701 | 91 | 172 / 189 | None | ABC49808 |
| MLOC_5617.1 | 3357 | 4e-66 | 565 - 753 | 91 | 172 / 189 | None | ABC49808 |