barSeed - Barley Seed Development Database

Probe ABC40829

Source Contig ABC40829

barSeed

Links

Affymetrix Source Sequence (332 bp)

>ABC40829 332
AAGATGGGAACAAAAGGAACAGCTTCAGCATAGTATGCTATTTTAACTGCCACTGTACCT
ATCAACCAGATGAAGTAATTTGAAGAATGCAGGCCAAAGAAAAAATTAAGCCTCTGTAAC
ATAGGGAGTCTCAGTGATAAACCTTTGTGTGTTCTCGTTTTTTATTTTGAGAGTGTTGAT
TCTTTGAAATGAGAGTGGAGTTCTTGCTCCTCCCCAATCCCAAAATCCTCATGTAACTAT
ATGCTATCTCATGTAACTGCTTGATGCTGTGATAATATATGTTNCAGGCCGGAAAAAAAG
CCCCATTGTTGTGATAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK354961	1959	5e-137	1667 - 1957	97	284 / 293	CUST_34416_PI390587928 CUST_26904_PI390587928 CUST_20963_PI390587928	ABC07126 ABC39121 ABC40829 ABC41063 ABC49808
MLOC_79912.2	280	1e-127	7 - 280	97	267 / 276	None	ABC40829 ABC49808
MLOC_79912.1	629	5e-127	338 - 629	95	281 / 297	None	ABC40829 ABC49808
MLOC_32246.1	2044	2e-120	13 - 303	94	274 / 293	None	ABC40829 ABC49808
MLOC_49524.2	1357	5e-117	215 - 501	93	270 / 290	None	ABC40829 ABC49808
MLOC_49524.1	523	5e-117	218 - 504	93	270 / 290	None	ABC40829 ABC49808
MLOC_49524.5	1208	5e-117	200 - 486	93	270 / 290	None	ABC40829 ABC49808
MLOC_49524.6	1553	5e-117	200 - 486	93	270 / 290	None	ABC40829 ABC49808
MLOC_49524.3	1516	5e-117	200 - 486	93	270 / 290	None	ABC40829 ABC49808
MLOC_49524.4	1490	5e-117	200 - 486	93	270 / 290	None	ABC40829 ABC49808
MLOC_49524.7	1384	5e-117	187 - 473	93	270 / 290	None	ABC40829 ABC49808
MLOC_32246.2	1791	3e-100	1 - 243	94	228 / 243	None	ABC40829 ABC49808
MLOC_32245.1	527	2e-97	1 - 238	94	223 / 238	None	ABC40829 ABC49808
MLOC_32246.3	725	2e-91	2 - 225	94	210 / 224	None	ABC40829 ABC49808
MLOC_46791.1	340	9e-75	1 - 185	94	176 / 187	None	ABC40829 ABC49808
MLOC_5617.4	2131	7e-71	2 - 193	92	179 / 195	None	ABC40829 ABC49808
MLOC_5617.2	2704	7e-71	31 - 222	92	179 / 195	None	ABC40829 ABC49808
MLOC_5617.3	3471	7e-71	13 - 204	92	179 / 195	None	ABC40829 ABC49808