barSeed - Barley Seed Development Database

Probe ABC44348

Source Contig ABC44348

barSeed

Links

Affymetrix Source Sequence (636 bp)

>ABC44348 636
CTCAGACCGGGGCTGACCGAGAAGTTCAGCGTATTCTGATGGAACTACTGAATCAGATGG
ATGGATTTGATCAGACAGTGAATGTGAAGGTTATAATGGCAACCAATCGGGTAGATACTC
TAGATCCTGCTCTGCTGCGTCCAGGAAGACTGGACAGGAAAATTGAGTTCCCTCTGCCGG
ATCGGAGGCAGAAGAGGCTTGTTTTCCAAGTTTGTACTGCTAAGATGAACTTGAGTGATG
AGGTTGATTTGGAAGATTATGTCTCCAGACCTGATAAAATCAGTGTTGCTGATCTCACTG
CTATTTGCCAGGAAGCTGGCATGCATGCTGTCCGCAAAAATCGGTATGTTATCCTCCCCA
AGGACTTCGAGAAGGGTTACCGAACCAACGTCAAGAAGCCTGAGTCAGACTTTGACTTCT
ACAAATGAGGCAACAAACTGTTAAGAGGATGCTTTATTTTCTATGGGCGACATGATTAAC
AGTATCGATGAATTTGTGGATAGTCGCCTGATAAAATATCCTTGTATCTCGGTGCTCATG
TAGTTTGCACGTTCAGTTTCACCATCGTTGTTAAGCTACTTGTCTGTACAATTCCTTCTT
CCTAAAGTTTCTCTTGACTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK376837	3868	0.0	912 - 1546	99	626 / 635	CUST_32934_PI390587928 CUST_6734_PI390587928	ABC04561 ABC09131 ABC22323 ABC44348
MLOC_41158.1	231	2e-118	1 - 231	100	231 / 231	None	ABC04561 ABC44348
MLOC_78835.1	656	3e-92	432 - 642	96	202 / 211	CUST_6734_PI390587928	ABC04561 ABC44348
MLOC_68072.1	494	3e-62	85 - 232	96	142 / 148	None	ABC04561 ABC44348