- Probe ABC04561
- Source Contig ABC04561
Affymetrix Source Sequence (1714 bp)
>ABC04561 1714 TTCCCTTCTTCCAAGCAAACCGCTCTTCGCGTCTCAGGTTCCTCTGCACACCGCTCCGCT CCTCTCGACAGATCGGAGCCGCAGACCCGCCCCCCGCCACCAAACCCTAGCCCCCCGCGA TGTCGGCCGCGGCCGTCGCGCCGAGCCCGCCGGCGGCCCCGCCGTCCTACCCCGCGGCGC CCTCCGCCCCCTCCGCCGAGGACGACGACGACCTCTACGGCCGCCTCAAGTCGCTGCAGC GCCACATGGAGTTCGTCGAGATCCAGGAGGAGTACGTCAAGGACGAGCAGAAGAACCTTA AGCGCGAGCTGCTGCGCGCGCAGGAGGAGGTCAAGCGGATCCAGTCGGTGCCGCTCGTCA TCGGCCAGTTCATGGAGATGGTCGACGGCAACAACGGCATCGTCGGCTCCACCACCGGCA GCAACTACTACGTGCGCATCCTCAGCACCATCAACCGCGAGCTGCTCAAGCCCTCCGCCT CCGTCGCCCTGCACCGCCACTCCAACGCCCTCGTCGACGTGCTGCCCCCCGAGGCCGACT CCAGCATCTCGCTCCTCGCCTCCTCCGAGAAACCCAACGTCCTCTACTCGGACATTGGAG GATGTGATATCCAAAAACAAGAAATTCGCGAGGCAGTTGAGTTACCATTGACACATCATG AATTGTACAAGCAGATTGGTATTGATCCTCCAAGAGGGGTGCTGCTCTATGGTCCTCCAG GCACTGGCAAGACCATGCTTGCTAAAGCTGTGGCACATCACACTACTGCTGCTTTTATCA GAGTGGTTGGTTCAGAGTTTGTGCAGAAGTACCTGGGTGAGGGCCCAAGGATGGTTCGAG ATGTATTCCGCTTAGCTAAAGAGAATGCCCCGGCTATAATATTCATTGATGAGGTTGATG CTATAGCCACTGCTCGATTCGATGCTCAGACCGGGGCTGACCGAGAAGTTCAGCGTATTC TGATGGAACTACTGAATCAGATGGATGGATTTGATCAGACAGTGAATGTGAAGGTTATAA TGGCAACCAATCGGGCAGATACTCTAGATCCTGCTCTGCTGCGTCCAGGAAGACTGGACA GGAAAATTGAGTTCCCTCTGCCGGATCGGAGGCAGAAGAGGCTTGTTTTCCAAGTTTGTA CTGCTAAGATGAACTTGAGTGATGAGGTTGATTTGGAAGATTATGTCTCCAGACCTGATA AAATCAGTGCTGCTGATATCACTGCTATTTGCCAGGAAGCTGGCATGCATGCTGTCCGCA AAAATCGGTATGTTATCCTCCCCAAGGACTTCGAGAAGGGTTACCGAACCAACGTCAAGA AGCCTGAGTCAGACTTTGACTTCTACAAATGAGGCAACAAACTGTTAAGAGGATGCTTTA TTTTCTACTGGCGACATGATTAACACTATCGATGAATTTGTGGATAGTCGCCTGATAAAA TATCCTTGTATCTCGGTGCTCATGTAGTTTGCACGTTCAGTCTCACCATCCTTGTTAAGC TACTTGTCTGTACAATTCCTTCTTCCTAAAGTTTCTCTTGACCAGTTTGCGCTTGTGGAG GCTGTGATTGTCTTCCAAAGGAGAACCGAGTACCACCTTTCCGTTCTTAAAATATAAAGT GCATTAATCCTTTGGAATTTTAAACTTCCTCACATTTGACAAACTTTATTATTAAATATT AACATTTAATATACAAAGTTATTATCATTAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| AK376837 | 3868 | 0.0 | 2 - 1529 | 99 | 1522 / 1528 | CUST_6734_PI390587928 CUST_32934_PI390587928 | ABC04561 ABC09131 ABC22323 ABC44348 |
| MLOC_30915.1 | 625 | 0.0 | 2 - 625 | 94 | 588 / 624 | None | ABC04561 ABC22323 |
| MLOC_33460.1 | 658 | 1e-160 | 21 - 346 | 98 | 320 / 326 | None | ABC04561 |
| MLOC_78835.1 | 656 | 2e-148 | 327 - 642 | 97 | 306 / 316 | CUST_6734_PI390587928 | ABC04561 ABC44348 |
| MLOC_46964.1 | 531 | 3e-121 | 1 - 255 | 98 | 249 / 255 | None | ABC04561 |
| AK356464 | 1524 | 5e-114 | 854 - 1086 | 99 | 230 / 233 | CUST_7701_PI390587928 CUST_34938_PI390587928 | ABC04561 ABC22323 ABC46818 |
| MLOC_47337.1 | 404 | 5e-114 | 122 - 354 | 99 | 230 / 233 | None | ABC04561 ABC22323 |
| MLOC_68904.1 | 2548 | 4e-55 | 1328 - 1460 | 96 | 129 / 134 | None | ABC04561 ABC22323 |
| MLOC_41158.1 | 231 | 6e-113 | 1 - 231 | 99 | 228 / 231 | None | ABC04561 ABC44348 |
| MLOC_68904.3 | 1106 | 3e-111 | 1 - 228 | 99 | 226 / 229 | None | ABC04561 ABC22323 |
| MLOC_47298.1 | 357 | 2e-98 | 156 - 357 | 99 | 200 / 202 | None | ABC04561 ABC22323 |
| MLOC_53599.1 | 378 | 5e-79 | 188 - 348 | 100 | 161 / 161 | CUST_6734_PI390587928 | ABC04561 |
| MLOC_45410.1 | 166 | 9e-77 | 1 - 166 | 98 | 163 / 166 | None | ABC04561 |
| MLOC_40768.1 | 239 | 7e-73 | 1 - 150 | 100 | 150 / 150 | None | ABC04561 |
| MLOC_68904.2 | 567 | 4e-70 | 2 - 149 | 99 | 147 / 148 | None | ABC04561 ABC22323 |
| MLOC_68904.4 | 1178 | 5e-64 | 1 - 137 | 99 | 136 / 137 | None | ABC04561 ABC22323 |
| MLOC_68072.1 | 494 | 2e-62 | 84 - 232 | 96 | 143 / 149 | None | ABC04561 ABC44348 |