barSeed - Barley Seed Development Database

Probe ABC43123

Source Contig ABC43123

barSeed

Links

Affymetrix Source Sequence (560 bp)

>ABC43123 560
AGGTGGTGGAATGAGGCAGGTAGGAGTTCTATGTGCTGCTGCTTATGTTGCAGTTCGCGA
CAACGTAGGCAAGTTTGCCGATGACCACAGGAAGGTTAAAGTATTAGCAGATGGGTTGAA
GAAAATTAAACAGTTTACAGTTGATTTAACTTCAGTGGAGACCAATATGGTATTCTTCGA
TATCGCGGATCCACGCATAACATTTGACAAACTGTGTCAATTCTTGGAACGGCGCAATGT
GCTTGCGATGCCAGGAACTTCCAAGAGCGTCAGACTTGTCATTCACTACCAAATTTCAGA
TAGTGACGTCCAGTATATTTTGACATGTATCGAGAAAGCTGTGGAGGAAATACTGTCAGG
CAATGCAAAGTTCGAGCACTTGACAAACGGCAGTACCACGAATTCATATGGGCATTAGGC
CACTTCTTTTTGCGCCCACTTATGAAGAAGGGCAGTATCTAGTTTGTTTGTGGCCTTGGC
CTTTTGTAGTAGTAACAACTTTGCAGAATAATATGTTGTTTTTGGGCCGATGGAAGTCCC
CCCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_11927.1	1716	0.0	54 - 598	97	528 / 545	None	ABC12316 ABC16415 ABC43123
MLOC_11927.3	1569	0.0	23 - 460	97	424 / 438	None	ABC12316 ABC16415 ABC43123
MLOC_11927.2	1559	0.0	23 - 460	97	424 / 438	None	ABC12316 ABC16415 ABC43123
MLOC_67489.2	1580	4e-160	903 - 1325	91	384 / 423	CUST_13882_PI390587928	ABC12316 ABC16415 ABC43123
MLOC_67489.3	1557	4e-160	852 - 1274	91	384 / 423	CUST_13882_PI390587928	ABC12316 ABC16415 ABC43123
MLOC_67489.1	1910	4e-160	1184 - 1606	91	384 / 423	CUST_4273_PI390587928 CUST_13882_PI390587928	ABC12316 ABC16415 ABC43123
AK370718	2352	4e-125	1939 - 2218	96	268 / 280	CUST_5723_PI390587928	ABC12316 ABC16415 ABC43123
AK361997	1436	3e-92	734 - 1151	81	340 / 418	None	ABC12316 ABC16415 ABC43123
MLOC_15422.2	623	2e-64	297 - 598	81	246 / 302	None	ABC12316 ABC16415 ABC43123