- Probe ABC16415
- Source Contig ABC16415
Affymetrix Source Sequence (1565 bp)
>ABC16415 1565 CCCGGGCTGCAGGCACGACTGGTGTTGGTGTGCTGCTGCTATCTACAGTATCTATCTATG AAAACGATCGCGATCAACCAGAGTATTCTCTAGCAAGTCGTCTCGCTGCTGCAGAAACGA TGGCGGCCAAGGTGGTGGACCTGCGGTCGGACACGGTGACCAAGCCGTCGGAGGCCATGC GGGCCGCCATGGCCGCGGCGGACGTCGACGACGACGTGCTGGGAGCCGACCCCACGGCCC GGCGCTTCGAGGCGGAGATGGCCCGGATCATGGGCAAGGAGGCGGCGCTGTTCGTGCCGT CCGGCACCATGGCCAACCTCATCTCCGTCCTGGCGCACTGCGACGCCAGGGGCAGCGAGG TCATCCTCGGCGACGACTCCCACATCCACGTCTACGAGCACGGCGGCATCTCCACCCTCG GCGGCGTCCACCCCAGGACTGTCCCCAACAACCCCGACGGCACCATGGACGTCGACAGGA TCGTCGCTGCCATCCGGAGCCCCGACGGCGCGCTCTACTACCCCACCACCAGGCTCATCT GCCTCGAGAATACCCATGGAAATTCTGGTGGGAAGTGTCTGACTGTCGAATATACTGACA AGGTTGGGGAAGTTGCAAAGGCTCATGGCTTGAAGCTTCATATCGACGGAGCTCGTATTT TCAATGCTTCTGTTGCGCTTGGAGTTCCTGTCGATACACTTGTGAGAGCTGCTGATTCAG TTTCGGTATGCCTGTCGAAAGGGATAGGTGCTCCTGTTGGATCAGTTATTGTTGGTTCCA AGGCCTTCATAAACAAGACTAAAATTCTTAGGAAGACGCTAGGTGGTGGAATGAGGCAGG TAGGGGTTCTCTGTGCTGCTGCAGAAGTCGGAGTTCGCGATACCATCGGCAAGCTTACCG ACGACCATAGGAAGGCCAAAGTTTTAGCTGACGGACTGAAGAAAATCGAACAGTTTACAG TTGATTTGACTTCAGTGGAGACCAATATGGTATTCTTTCACATGGCGGATCCACGCATCA CTCCGGCCAAACTGTGCAAAGTCCTGGAGCAGCGCAATGTGCTTGCAATGCCAACAAGTT CCAAGAGCGTAAGACTTGTGGTTCATTACCAAATTTCAGATAGTGATGTCCAGTATACCC TGACATGCATCGAGAAAGCCGTTGGTGAAATACTGGCATGCGACGCTAAACTGGAGCGTC CGACGAACGGCGCCGCCGCGAATTCATAAGGGCACTAGCACTAAGCTAGCTAGGCCACTT CCTCTTTGTGGCAACCTATGCACAATGCATCGATGAAGAAATGCAGTACCATCCTGCTTG TTTTTGGTCGTGGCCTTGGTGACAGTATCGACAACTGTGCGGAATAATCGATTGCCTGCT TATGAGTCCAATGTCAATGTGAACGTTGTTCTTCAGCTTGGATAACATGATATGCAATCC AGCTAGGGATACTAAGGATACTGGAAATGTTGGCCATCGCTTGTCCACAAGTGTATTTTT TAAATTCATGTATATCTTTTGGGATACACGACCGTTTTTTTAATTTCGAAAAAAAAAAAA AAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| AK361997 | 1436 | 0.0 | 3 - 1436 | 99 | 1433 / 1434 | None | ABC12316 ABC16415 ABC43123 |
| MLOC_5328.2 | 1210 | 0.0 | 1 - 914 | 99 | 912 / 914 | None | ABC12316 ABC16415 |
| MLOC_5328.4 | 1118 | 0.0 | 1 - 814 | 99 | 813 / 814 | None | ABC12316 ABC16415 |
| MLOC_5328.3 | 1033 | 0.0 | 1 - 819 | 99 | 813 / 819 | None | ABC12316 ABC16415 |
| MLOC_67489.2 | 1580 | 0.0 | 201 - 1320 | 87 | 976 / 1120 | CUST_13882_PI390587928 | ABC12316 ABC16415 ABC43123 |
| MLOC_67489.1 | 1910 | 0.0 | 482 - 1601 | 87 | 973 / 1120 | CUST_13882_PI390587928 CUST_4273_PI390587928 | ABC12316 ABC16415 ABC43123 |
| MLOC_6226.2 | 1645 | 0.0 | 322 - 1472 | 86 | 992 / 1156 | CUST_6145_PI390587928 | ABC12316 ABC16415 |
| MLOC_5328.1 | 1019 | 2e-128 | 1 - 253 | 99 | 252 / 253 | None | ABC12316 ABC16415 |
| MLOC_15422.2 | 623 | 0.0 | 1 - 605 | 99 | 599 / 605 | None | ABC12316 ABC16415 ABC43123 |
| MLOC_11927.1 | 1716 | 0.0 | 181 - 1306 | 84 | 944 / 1130 | None | ABC12316 ABC16415 ABC43123 |
| MLOC_6226.4 | 1491 | 0.0 | 175 - 1054 | 88 | 771 / 880 | CUST_6145_PI390587928 | ABC12316 ABC16415 |
| AK370718 | 2352 | 0.0 | 759 - 1733 | 84 | 823 / 976 | CUST_5723_PI390587928 | ABC12316 ABC16415 ABC43123 |
| MLOC_6226.3 | 1528 | 0.0 | 576 - 1392 | 87 | 711 / 817 | CUST_6145_PI390587928 | ABC12316 ABC16415 |
| MLOC_67489.3 | 1557 | 6e-123 | 832 - 1269 | 85 | 372 / 438 | CUST_13882_PI390587928 | ABC12316 ABC16415 ABC43123 |
| MLOC_15422.1 | 848 | 2e-77 | 673 - 830 | 100 | 158 / 158 | None | ABC16415 |
| MLOC_11927.3 | 1569 | 3e-66 | 150 - 452 | 82 | 248 / 303 | None | ABC12316 ABC16415 ABC43123 |
| MLOC_11927.2 | 1559 | 3e-66 | 150 - 452 | 82 | 248 / 303 | None | ABC12316 ABC16415 ABC43123 |