barSeed - Barley Seed Development Database

Probe ABC35448

Source Contig ABC35448

barSeed

Links

Affymetrix Source Sequence (611 bp)

>ABC35448 611
CCACCGACAAGAATAGCTGTTGAGGCAGTTGAGCCAGCATCTCTGGTGTGGCTACTATCA
GCTTTCAGAAACTCTGAATCGGTATGATTGAATGTTTCAGCAATAGCAGCCTTTGTATCT
GTCATGAATTTCTTCATCTCCCGCGAGTTCCGGGTGGGGCCATTCGCGCTCAGCGTGTTC
CGGCTCACGTGGCGGTCGGCGTTCGTCTGCCTCACCACCGTCTTCGCCATGCTGCTCCCC
TTCTTCGGCAACGTGGTGGGACTTCTGGGAGCCGTCTCCTTCTGGCCGCTCACCGTCTAC
TTCCCCGTCGAGATGTACATCAGGCAGCGCGGCGTGCCCGGGAGGAGCACGCAGGGGATC
TGCCTTAGGATGCTCAGCGTCGGATGCCTCATCGTGTCCATCGCCGCCGCAGCGGGCTCC
ATCGCCAACGTTATCGAAGCGCTCAAAGTGTACAAGCCGTTCAGCGGCTGATTAGCACCA
CCTGCACCAATTCCCCTCCCTACCGAAATGATTATAGTTGAAAACAACTATAATTATTTA
CATACAAAGGAAGTAGTTATAACTGTATGCAATACATACATTACATACACCGCTAAAAAA
AAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_37989.3	1986	0.0	1269 - 1735	100	467 / 467	CUST_6583_PI390587928 CUST_6587_PI390587928	ABC02996 ABC02999 ABC35448
MLOC_37989.2	2247	0.0	1540 - 2006	100	467 / 467	CUST_6583_PI390587928 CUST_6587_PI390587928	ABC02996 ABC02999 ABC35448
MLOC_58471.3	1797	3e-92	1207 - 1546	85	288 / 340	None	ABC02996 ABC02999 ABC35448
MLOC_58471.4	1953	3e-92	1180 - 1519	85	288 / 340	CUST_6585_PI390587928	ABC02996 ABC02999 ABC35448
MLOC_58471.2	2096	3e-92	1512 - 1851	85	288 / 340	CUST_6585_PI390587928	ABC02996 ABC02999 ABC35448
MLOC_58471.1	2063	3e-92	1490 - 1829	85	288 / 340	CUST_6585_PI390587928	ABC02996 ABC02999 ABC35448
AK375388	1449	2e-63	413 - 544	100	132 / 132	CUST_6607_PI390587928	ABC02995 ABC07672 ABC35448
MLOC_79926.1	1748	2e-63	663 - 794	100	132 / 132	None	ABC02995 ABC07672 ABC35448