barSeed - Barley Seed Development Database

Probe ABC31564

Source Contig ABC31564

barSeed

Links

Affymetrix Source Sequence (625 bp)

>ABC31564 625
CCACCTTCTGCATCCCACCTCTCCGGCGAGATCTCTCTCCGCCCCGCGCCGCGCCGCAGC
CAGCCATGGACGCCGTGGACTCCGTGGTCGACCCGCTCCGGGAGTTCGCCAAGGACAGCG
TCCGCCTCGTCAAGCGCTGCCACAAGCCCGATCGAAAGGAGTTTACCAAGGTGGCCATTC
GGACGGCCATCGGGTTCGTCGTCATGGGCTTCGTCGGCTTCTTCGTCAAGCTCATCTTCA
TCCCCATCAACAACATCATCGTCGGGTCGGGCTGATTTGGTCCTCCGCAGGTGAGGGGCC
GCAGGACGAGAGGATGGTGTTCATTCATGGAGGCGGCGCTGGCTTTCTTGTCCTCGTACC
TTAAAGCAATTCATTTAGGACTTCATTGTAGAGGAATCTTTCTTGTCCCTTGTGTTTTCA
TTCGAAACAGTTGTATTGGTAGACCTGGAGCAGTTTTGAACCTGATACCGGCTAGACCGT
AATATCAAGTACCGTGTCAAATGACAAGAATGAAACCCTATCGTTTCCTCTCAGGTGCAT
TTTCCTATGATGCCTTTACTTTCATCAAGCTTTATGTGTAATTGTCCCAAAGGAAATTAT
TATGTGTCATGGCATGCAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_35029.1	630	0.0	1 - 485	99	482 / 485	None	ABC03679 ABC03680 ABC03681 ABC25607 ABC31564
AK359807	1857	6e-89	79 - 304	93	211 / 227	CUST_16341_PI390587928 CUST_16344_PI390587928	ABC03679 ABC03680 ABC03681 ABC31564 ABC31723
MLOC_71188.1	612	6e-89	281 - 506	93	211 / 227	None	ABC03679 ABC03680 ABC03681 ABC31564