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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_16344_PI390587928Hv_44K_v2GTTAAAGACCTGTTTTCTGAGAAATTGTCACCAGCTTAATCATCGTAATGAGTATAGATC437GeneList: saddlebrown
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.4310.3990.8321.3171.1941.386
Raw 14916.83321830.80039994.40093166.63330983.06739919.500



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35980718572e-241435 - 149410060 / 60plus ABC03679 ABC03680 ABC03681 ABC31564 ABC31723
JLOC1JLOC1_47284.115318e-25579 - 63810060 / 60plus
Harvest21ABC036795493e-25438 - 49710060 / 60plusABC03679
Harvest35U35_156155933e-25438 - 49710060 / 60plus



Contig Sequence (593 bp)

>U35_15615 593 Hv_44K_v2
GCTTTTTCTTGTAGGGAAGAAAAGTTTATAAAAGAAGCCATCGGCGACACCCACCCGCAC
AAATCCAAACAGCATCCTCCCGTCGGCTTCCTCCCCCTCACGCGCGCGACCTCGTCGTCG
TCGGCTCCGAGATCTCGCCGCGCCTCGCCCGCCATGGACGCCGTCGACTCCGTCGTCGAC
CCCCTCCGCGAGTTCGCCAAGGACAGCGTCCGCCTCGTCAAGCGCTGCCACAAGCCCGAC
CGCAAGGAGTTCACCAAGGTGGCCGCGCGGACGGCCATCGGGTTCGTCGTCATGGGGTTC
GTCGGCTTCTTCGTCAAGCTCATCTTCATCCCCATCAACAACATCATCGTCGGCTCCGGC
TAGGGTTGGAGGACAACAGGGATAGTGTGATGCCGGCAGTTGAGCCTGCAGCGCCCAAAG
TTTGTTCTGAAGTTGTTGTTAAAGACCTGTTTTCTGAGAAATTGTCACCAGCTTAATCAT
CGTAATGAGTATAGATCTTAAAAAAAAAAAAAAATAAAGTTTATGTTTTGTCATAAAAAA
AAAAAAGGTGCAAAGGTAGATCGCTGATCGCAAGTGAAAAAAAAAAAAAAAAA



Homology of Contig U35_15615 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None