barSeed - Barley Seed Development Database

Probe ABC03679

Source Contig ABC03679

barSeed

Links

Affymetrix Source Sequence (549 bp)

>ABC03679 549
GCTTTTTCTTGTAGGGAAGAAAAGTTTATAAAAGAAGCCATCGGCGACACCCACCCGCAC
AAATCCAAACAGCATCCTCCCGTCGGCTTCCTCCCCCTCACGCGCGCGACCTCGTCGTCG
TCGGCTCCGAGATCTCGCCGCGCCTCGCCCGCCATGGACGCCGTCGACTCCGTCGTCGAC
CCCCTCCGCGAGTTCGCCAAGGACAGCGTCCGCCTCGTCAAGCGCTGCCACAAGCCCGAC
CGCAAGGAGTTCACCAAGGTGGCCGCGCGGACGGCCATCGGGTTCGTCGTCATGGGGTTC
GTCGGCTTCTTCGTCAAGCTCATCTTCATCCCCATCAACAACATCATCGTCGGCTCCGGC
TAGGGTTGGAGGACAACAGGGATAGTGTGATGCCGGCAGTTGAGCCTGCAGCGCCCAAAG
TTTGTTCTGAAGTTGTTGTTAAAGACCTGTTTTCTGAGAAATTGTCACCAGCTTAATCAT
CGTAATGAGTATAGATCTTAAAAAAAAAAAAAAATAAAGTTTATGTTTTGTCAAAAAAAA
AAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_71188.1	612	0.0	146 - 612	100	467 / 467	None	ABC03679 ABC03680 ABC03681 ABC31564
AK359807	1857	3e-71	1361 - 1530	95	162 / 170	CUST_16341_PI390587928 CUST_16344_PI390587928	ABC03679 ABC03680 ABC03681 ABC31564 ABC31723
MLOC_35029.1	630	6e-89	213 - 439	93	211 / 227	None	ABC03679 ABC03680 ABC03681 ABC25607 ABC31564