barSeed - Barley Seed Development Database

Probe ABC03680

Source Contig ABC03680

barSeed

Links

Affymetrix Source Sequence (604 bp)

>ABC03680 604
GAGCAAGCCCACCTCCACCTTCTGCATCCCACCTCTCCGGCGAGATCTCTCTCCGCCCCG
CGCCGCGCCGCAGCCAGCCATGGACGCCGTGGACTCCGTGGTCGACCCGCTCCGGGAGTT
CGCCAAGGACAGCGTCCGCCTCGTCAAGCGCTGCCACAAGCCCGATCGAAAGGAGTTTAC
CAAGGTGGCCATTCGGACGGCCATCGGGTTCGTCGTCATGGGCTTCGTCGGCTTCTTCGT
CAAGCTCATCTTCATCCCCATCAACAACATCATCGTCGGGTCGGGCTGATTTGGTCCTCC
GCAGGTGAGGGGCCGCAGGACGAGAGGATGGTGTTCATTCATGGAGGCGGCGCTGGCTTT
CTTGTCCTCGTACCTTAAAGCAATTCATTTAGGACTTCATTGTAGAGGAATCTTTCTTGT
CCCTTGTGTTTTCATTCGAAACAGTTGTATTGGTAGACCTGGAGCAGTTTTGAACCTGAT
ACCGGCTAGACCGTAATATCAAGTACCGTGTCAAATGACAAGAATGAAACCCTATCGTTT
CCTCTAAAAAAAAAAAAAAAAAAGATGCCTTTACTTTCATCAACTATGAAAAAAAAAAAA
AAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_35029.1	630	0.0	1 - 499	99	495 / 499	None	ABC03679 ABC03680 ABC03681 ABC25607 ABC31564
AK359807	1857	6e-89	79 - 304	93	211 / 227	CUST_16341_PI390587928 CUST_16344_PI390587928	ABC03679 ABC03680 ABC03681 ABC31564 ABC31723
MLOC_71188.1	612	6e-89	281 - 506	93	211 / 227	None	ABC03679 ABC03680 ABC03681 ABC31564