barSeed - Barley Seed Development Database

Probe ABC21521

Source Contig ABC21521

barSeed

Links

Affymetrix Source Sequence (577 bp)

>ABC21521 577
TGGTTGCTTGGATGCATCTGCCAGTCCATGGCGAACAAGCTCAGCGAGTCGGACTCCCAT
GTTCTCGACCTGCGAACGGCATTCGAAGCAGGTCTGGGAGCTAACGGAGAATGGACACCT
TGTAAGCAGCTACTCAGGATTGTGTGCTACAGTGCACTCCAGCAAGGAAGGAGAGAGTGA
AACTACTGGAGCACGAGCATGGACAGCAACTGGAGACAAAGGAGAGATCTACGTGGCCTT
CTTCAACCTTGACACTGCGAGCAGGAAGATCGCTGTAAGGGTGCCGGATCTAGAGAAGGT
TGCAGGGAGAAAGTTGGCAAGGAAACACCTGTGCACCTGCACTGAAGTCTTGAGTGGAAA
GAGCCGGAGTCTCATGAAGGGGGACATCTCAGCGGTGGTGAGCTCACATGGCTCCATGTT
GTTTGAAATCCAGTGTTGAAGTCTCCCTAATGTTGGCAGTTCATCTTGGAACTTGGAAGC
ATAGGACGTTTGGGTGTAATTTATCTAGTTGTTGGCAATCCTTTGTACAACATACTTCTA
ATAAAGTAAGCATTTTAATCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_4373.1	3998	0.0	1834 - 2395	100	562 / 562	CUST_10467_PI390587928 CUST_41824_PI390587928 CUST_19142_PI390587928 CUST_25919_PI390587928	ABC21521
MLOC_4373.5	2055	0.0	1 - 366	100	366 / 366	CUST_10467_PI390587928	ABC21521
MLOC_4372.4	2312	1e-180	1936 - 2278	100	343 / 343	CUST_41824_PI390587928 CUST_19142_PI390587928 CUST_25919_PI390587928	ABC21521
MLOC_4373.2	2228	2e-113	417 - 638	100	222 / 222	CUST_10467_PI390587928 CUST_19142_PI390587928	ABC21521
MLOC_4373.3	2322	2e-113	417 - 638	100	222 / 222	CUST_19142_PI390587928	ABC21521
MLOC_4372.1	2574	1e-115	1939 - 2173	99	234 / 237	CUST_19142_PI390587928 CUST_25919_PI390587928 CUST_41824_PI390587928	ABC21521