barSeed - Barley Seed Development Database

Probe ABC20714

Source Contig ABC20714

barSeed

Links

Affymetrix Source Sequence (715 bp)

>ABC20714 715
GTATTTCAAGCGACGAGCCTTCTGATAATGCAAAAAGGAGAAAGAGTCATTCTCGTAAAA
ACAGCATGTCTCCGTCACCTCCAAAATCTAGGAGCAGACGAGTTTCGCGGTCTCCACCTA
GCAAGCATTCTCACCGCAGGCATTCACCTTATTCATCTGCTGAAAGGAAGAAGCGGTCGA
GATCCAGAACTCCGGTCAAGAGGAGGTAGAAGAAACTAGCTGGTTTTGTTTGTTTCACCT
AGGGGTGCTTGCCCTTTGTCCTTCCGATGAAGAAACAGCATTTGCACGCCCACGAAACAA
GATGCTGGATCTAGCTTCCAACAAAGAAGACGACTCGACGGCTCACGTGATGGATGTTGT
TTGAAGGATGATGCATGGTGCCCAGCGGAAGATATGTCCGGTTTGCCAATATTAGGATAT
GTAATGTCTTGTACAAGCAGCAGACTTCATAATTTGTAGCGCTAGCGTCCCTTTTAACTA
TTTTATTACTTGTATTTTCTCTTAAGGTCATGTATTATTAGTATGCAAGGAGACTGGTCG
AGTTTCGTCGTGACATGCTGCGATGTAATTTTGTATGGTTATATGCACTAGCCTATCCCT
GAATCATAATTAGGTCTGGAAAATGTGTTGCAGGCCTCCACATGTAATTTATCTTATCAT
ATGGACATGCTGGAATTTATTCAGCATTCAGTTGCAGTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_22342.22	2916	0.0	2380 - 2915	100	536 / 536	CUST_32966_PI390587928 CUST_31451_PI390587928 CUST_10998_PI390587928	ABC20714
MLOC_22342.18	2298	0.0	1949 - 2298	100	350 / 350	CUST_32966_PI390587928 CUST_31451_PI390587928 CUST_36641_PI390587928	ABC20714
MLOC_22342.17	2652	0.0	2303 - 2652	100	350 / 350	CUST_32966_PI390587928 CUST_31451_PI390587928 CUST_36641_PI390587928	ABC20714
MLOC_22342.1	2578	3e-128	2330 - 2578	100	249 / 249	CUST_32966_PI390587928 CUST_31451_PI390587928 CUST_36641_PI390587928	ABC20714
MLOC_22342.13	3153	7e-114	2931 - 3153	100	223 / 223	CUST_32966_PI390587928 CUST_31451_PI390587928 CUST_36641_PI390587928	ABC20714
MLOC_22342.16	3765	2e-104	3560 - 3765	100	206 / 206	CUST_32966_PI390587928 CUST_31451_PI390587928 CUST_36641_PI390587928	ABC20714
MLOC_22342.6	2657	2e-104	2452 - 2657	100	206 / 206	CUST_32966_PI390587928 CUST_31451_PI390587928 CUST_36641_PI390587928	ABC20714
MLOC_22342.7	3307	2e-104	3102 - 3307	100	206 / 206	CUST_32966_PI390587928 CUST_31451_PI390587928 CUST_36641_PI390587928	ABC20714
MLOC_22342.8	3252	2e-104	3047 - 3252	100	206 / 206	CUST_32966_PI390587928 CUST_31451_PI390587928 CUST_36641_PI390587928	ABC20714
MLOC_22342.9	2289	3e-98	2095 - 2289	100	195 / 195	CUST_32966_PI390587928 CUST_31451_PI390587928 CUST_36641_PI390587928	ABC20714
MLOC_22342.10	3103	2e-95	2907 - 3103	99	195 / 197	CUST_32966_PI390587928 CUST_31451_PI390587928 CUST_36641_PI390587928	ABC20714
MLOC_22342.19	3965	3e-93	3780 - 3965	100	186 / 186	CUST_32966_PI390587928 CUST_31451_PI390587928 CUST_36641_PI390587928	ABC20714
MLOC_22342.3	4469	9e-93	4285 - 4469	100	185 / 185	CUST_32966_PI390587928 CUST_31451_PI390587928 CUST_36641_PI390587928	ABC20714
MLOC_22342.12	3294	3e-88	3118 - 3294	100	177 / 177	CUST_32966_PI390587928 CUST_31451_PI390587928 CUST_36641_PI390587928	ABC20714
MLOC_22342.14	3178	1e-82	2417 - 2587	99	170 / 171	CUST_32966_PI390587928 CUST_31451_PI390587928 CUST_36641_PI390587928	ABC20714