- Probe CUST_32966_PI390587928
- Source Contig U35_28364
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_32966_PI390587928 | Hv_44K_v2 | CTACAAAGAGGAAAAGGGTTCTGACAGGTATGCAAAACATGGATTGGATAGATGGGATGA | 581 | GeneList: blue MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 1.975 | 1.748 | 1.288 | 0.677 | 0.428 | 0.387 |
| Raw | 284.690 | 362.849 | 252.878 | 194.857 | 45.918 | 46.523 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_22342.20 | 3166 | 2e-24 | 1682 - 1741 | 100 | 60 / 60 | plus | None |
| MLOC | MLOC_22342.9 | 2289 | 2e-24 | 1829 - 1888 | 100 | 60 / 60 | plus | ABC20714 |
| MLOC | MLOC_22342.10 | 3103 | 2e-24 | 2641 - 2700 | 100 | 60 / 60 | plus | ABC20714 |
| MLOC | MLOC_22342.4 | 3448 | 2e-24 | 1992 - 2051 | 100 | 60 / 60 | plus | None |
| MLOC | MLOC_22342.5 | 4336 | 2e-24 | 2880 - 2939 | 100 | 60 / 60 | plus | None |
| MLOC | MLOC_22342.22 | 2916 | 2e-24 | 841 - 900 | 100 | 60 / 60 | plus | ABC20714 |
| MLOC | MLOC_22342.3 | 4469 | 2e-24 | 3484 - 3543 | 100 | 60 / 60 | plus | ABC20714 |
| MLOC | MLOC_22342.14 | 3178 | 2e-24 | 2151 - 2210 | 100 | 60 / 60 | plus | ABC20714 |
| MLOC | MLOC_22342.15 | 3535 | 2e-24 | 2068 - 2127 | 100 | 60 / 60 | plus | None |
| MLOC | MLOC_22342.16 | 3765 | 2e-24 | 3294 - 3353 | 100 | 60 / 60 | plus | ABC20714 |
| MLOC | MLOC_22342.13 | 3153 | 2e-24 | 2665 - 2724 | 100 | 60 / 60 | plus | ABC20714 |
| MLOC | MLOC_22342.21 | 2633 | 2e-24 | 1751 - 1810 | 100 | 60 / 60 | plus | None |
| MLOC | MLOC_22342.11 | 3098 | 2e-24 | 1660 - 1719 | 100 | 60 / 60 | plus | None |
| MLOC | MLOC_22342.12 | 3294 | 2e-24 | 2852 - 2911 | 100 | 60 / 60 | plus | ABC20714 |
| MLOC | MLOC_22342.19 | 3965 | 2e-24 | 2354 - 2413 | 100 | 60 / 60 | plus | ABC20714 |
| MLOC | MLOC_22342.18 | 2298 | 2e-24 | 1683 - 1742 | 100 | 60 / 60 | plus | ABC20714 |
| MLOC | MLOC_22342.17 | 2652 | 2e-24 | 2037 - 2096 | 100 | 60 / 60 | plus | ABC20714 |
| MLOC | MLOC_22342.6 | 2657 | 2e-24 | 2186 - 2245 | 100 | 60 / 60 | plus | ABC20714 |
| MLOC | MLOC_22342.7 | 3307 | 2e-24 | 2836 - 2895 | 100 | 60 / 60 | plus | ABC20714 |
| MLOC | MLOC_22342.8 | 3252 | 2e-24 | 2781 - 2840 | 100 | 60 / 60 | plus | ABC20714 |
| MLOC | MLOC_22342.1 | 2578 | 2e-24 | 2064 - 2123 | 100 | 60 / 60 | plus | ABC20714 |
| MLOC | MLOC_22342.2 | 3685 | 2e-24 | 2175 - 2234 | 100 | 60 / 60 | plus | None |
| JLOC1 | JLOC1_15488.27 | 4021 | 8e-25 | 2488 - 2547 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.26 | 4544 | 8e-25 | 2571 - 2630 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.25 | 4370 | 8e-25 | 2397 - 2456 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.24 | 3413 | 8e-25 | 2436 - 2495 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.23 | 2449 | 8e-25 | 1541 - 1600 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.22 | 3074 | 8e-25 | 1541 - 1600 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.21 | 3883 | 8e-25 | 1910 - 1969 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.20 | 4022 | 8e-25 | 2605 - 2664 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.19 | 3713 | 8e-25 | 2736 - 2795 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.18 | 2582 | 8e-25 | 1674 - 1733 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.17 | 3969 | 8e-25 | 1996 - 2055 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.16 | 2625 | 8e-25 | 1648 - 1707 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.15 | 3011 | 8e-25 | 2034 - 2093 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.14 | 4046 | 8e-25 | 2629 - 2688 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.13 | 2948 | 8e-25 | 1971 - 2030 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.12 | 2692 | 8e-25 | 1715 - 1774 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.11 | 3598 | 8e-25 | 2065 - 2124 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.10 | 4038 | 8e-25 | 2065 - 2124 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.9 | 3975 | 8e-25 | 2002 - 2061 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.8 | 3535 | 8e-25 | 2002 - 2061 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.7 | 4607 | 8e-25 | 2634 - 2693 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.6 | 3044 | 8e-25 | 2067 - 2126 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.5 | 3613 | 8e-25 | 2636 - 2695 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.4 | 2997 | 8e-25 | 2020 - 2079 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.3 | 3655 | 8e-25 | 2678 - 2737 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.2 | 3654 | 8e-25 | 1681 - 1740 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_15488.1 | 4779 | 8e-25 | 2806 - 2865 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC27190 | 644 | 3e-25 | 582 - 641 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_28364 | 644 | 3e-25 | 582 - 641 | 100 | 60 / 60 | plus |
Contig Sequence (644 bp)
>U35_28364 644 Hv_44K_v2 GCTCTTCTTGGTCTTGCTAGTTATGATTCAGATGACGAGGATGATGATGGTGACGGTGAT GGTAAGGGTTTAATTTCAAATTTATCATCTGAAATTAAAGTTGGTGCAGCACTTCCTAAA GAAAGTGAGAAGAACATTGATGGCGCACTGCACAATAATAGTAACGGAAGTATTGCTTCA CTCCAAAGTGTTTCATCAGGAGATGATCATAAATCCAGTGATGAAAGATCTCAGAGTAGG CCAACTGCAGAATCTGAACGAGAGCCAAGTATTCATGACACACAGAATGGAGAAGCCAAA ACTTCTATTCAGCCAATTGGTGTGATTCATAAAACAAATGAGAAGGCACATGGTCATGCA GAGGTGGATTTCCAGAATGGGAAAACCTCTTCCGTCCATCATACTGAAAATAATAATAAT AATGCGGAGAGCACTCACAGGCATTTTGAAAGGAAAAGTCACGAGAAAGATCTTAAAGAG CCGAAGGTTGTCAATGGAATAGACTCTGAGCCTTCTAGAACTGATAAGTTTAGAGATGGT GACAAGCATAGCATGCCTGAAAATACTGATAAAAAAGGTACCTACAAAGAGGAAAAGGGT TCTGACAGGTATGCAAAACATGGATTGGATAGATGGGATGATGC
Homology of Contig U35_28364 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | Bradi5g24937.1 | 904 | 6e-56 | |
| Arabidopsis v10 | None |