barSeed - Barley Seed Development Database

Probe ABC20681

Source Contig ABC20681

barSeed

Links

Affymetrix Source Sequence (636 bp)

>ABC20681 636
CAGGGTCATCGTACTCCAGCATATGCTCAATATCTGCTCAGTACTTTGCCAAAATGCGAG
AAGTCCTGATTGAAAGGAATGTTCCATCTGCATTGAACTCTGGATTCTTAACACCATGCC
GCGAAAGGTTGTTTTTAGCACTTGGATTCGAGCTGTTTGCTGTAAATGATGAGAAGTTCA
TGGACATGTTCGTGTCTCCCGGCGCAGTTGATTGTATCCAGAATGAGCGCCAGTCTCTGC
TGAAACGTCAAAAGATTTTGCTGTCCTGTTTAAGCGAGTTCAAGAACATCTCGCGGACGC
TGTGATGAAGATCTGTCCGGCGCTTCTTCCACTGGCATGTATTTCATGAGCTTCAGGGTA
TTCCCTACAATACAACATAGTTATTAATGGTTGTTTTATTGTTGTTGCGCATCCTTCTAA
GCCTCCATGCCCCTCAACGCAGGCTGTTCTTTGTATTCTCTGTCTCCATGCCCCTTAACG
CAGGCTGTTCTTTGTATTCTCTGTATGTCAAATCCCGTATTGACAATTTGTGTGCTACTT
GGCATTTGTTGAACATGTATGTTATCCCTATCAGATATTGGGGCTATATAAGTCGTCGAT
AAAGTTGCAACTTGGATTTTAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK369068	2790	0.0	2194 - 2790	100	597 / 597	CUST_8199_PI390587928 CUST_8200_PI390587928	ABC11577 ABC20681
MLOC_66849.4	534	0.0	1 - 489	99	488 / 489	CUST_32230_PI390587928	ABC20681
MLOC_66849.3	1198	1e-55	758 - 875	100	118 / 118	CUST_8200_PI390587928	ABC11577 ABC20681
MLOC_66849.2	1113	1e-55	758 - 875	100	118 / 118	CUST_8200_PI390587928	ABC11577 ABC20681
MLOC_66849.1	1288	1e-55	863 - 980	100	118 / 118	CUST_8200_PI390587928	ABC11577 ABC20681