barSeed - Barley Seed Development Database

Probe ABC17054

Source Contig ABC17054

barSeed

Links

Affymetrix Source Sequence (1088 bp)

>ABC17054 1088
CCCGGGCTGCAGGAATTCGGCCGAGGAAAATGATGGATGATCATAATTATTATTTTATCA
TGGACTAACCCTTATGATACATGAATGTTGAACATAAGTGGGACGGTTTTACTTCCTCAA
TATTCATTGTTATATATAAGCCCTTTATGTGGTGTCGATTAGATGCCTGACTGTGGCATG
CTTGTTATTATTTCATATAAGCCCTTTGTGTGGTGTCGCTCAGACGTCCGACTGTGGCAT
GCTTGTTATTATTTCATATAAGCCTTTTATGTGGTGTCGCTCAGACGCCCGACTATGACA
CACATGTTATTATTTCTTATAAGCCCTTTATGTGGTGTCGCTCAGACGCCCGACTATGGC
ATGCATGTTATTATTTGTTATAATCCCTTTATGAGGTGTCGCTGAGATGCCCGACAGAGG
CATGCCTTATATCTTATCCTTTCAAGGCATCGCTCCAGACACCCGATCGGGCTATTTCAC
TGTTCTTGGAAATATTTGGGAGGATTACCACTCGATGTTCTGATTAATCTTTATTTCTTT
GATTGCTTATTAAATTATCAATATGGTTAAATTATCTGTTTGTTTGCACTTAAGAAGTTG
GATTATGACTGACGAAATATCATTGAATTATTTCAAGTGCATATTAACCACCTGCTATTT
TATGTTTGATTTCATGATGTTTACGAGTACATTCAAAGTACTTACTGGCATGTCCCTCGC
TATTGTCTTGGCCAGATTGCGTGTTTGGAGAGGAGCGTCCCGACGACAGCCCGGAACCTA
GGCGCCAAAGACAGCAGCCATGTGAGATAGGAATTATCCAGGTGATCTATTCCTGTGGGA
AATGGAGTCCCATAGACGCTGGAGATCCCCTAACTGCTTCCGCCATCAATGAGTAGAAAC
CTTTTTGATGTACTCCACATGCCATCTTGGTCTTGTACTTCAAATTTGTAATTTGCTTGG
ACATTTGTATCAAGGATTTGTGTACCAGCTAACAATATTCCTAGGGCTGGTATGCACAAG
GGTCATTTTGATGGGAATTAAAATCCCAGAAAAATCGGCCCTGACAATATCGTATCAAAA
ATTTCGGT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK252490.1	2727	4e-73	1914 - 2144	88	204 / 231	None	ABC09024 ABC17054
AK354054	964	5e-87	586 - 925	84	290 / 345	CUST_38641_PI390587928	ABC09024 ABC17054
AK357306	2789	3e-54	1604 - 1776	89	160 / 180	None	ABC17054
AK361220	2596	3e-55	1828 - 2059	84	200 / 239	None	ABC13024 ABC17054 ABC17862 ABC20255 ABC20943 ABC24039 ABC26250