barSeed - Barley Seed Development Database

Probe ABC15698

Source Contig ABC15698

barSeed

Links

Affymetrix Source Sequence (1259 bp)

>ABC15698 1259
AAAGGGTTGCTTATGAGAGGAGATGAAAAAGTGAAGGAAATTTCACTGTTTCTTCTTAAA
TGCCTGGTCTTAGATCAGATTTCGGCGAACATTCCACCCCACCAGGAAGAACACAATGAC
AACCTCTCGTCAGATGCTTCTCTTGCAACAGCTGCAGCTGGTGCATTCCATGTGATGATG
AGTGATTCAGAAGTCTGCCTAAATAAAAAGTTCCATGCAAGAATAAAGTTTTTATATAAG
CAGCGTTTTTTCTCAATACTGATGCCAATTTTTCTCTCTAAAATTAAGGAGACCCCGGAG
ATGACAACAAAATTGGTGATGTATCGAGCATTTGGACATATTATTTCTAATGCTCCAGTG
TCAGCAGTTATAACAGAAGCCCATCAGATTTTGCTCGTCATGGTTGATATCTTAGCTAAA
TTGAGCATGGATATTCAGGATAAAGATCTGGTATATAGTTTGTTGCTCGTCTTATCTGGA
ATGTTGATGGATGAAAAAGGCAAAGAATGCATTCTGGAAAATATGAACATTATTGTCAGT
GTACTTGCACAACTTGTTTCCTATCCTCACATGATGGTTGTTCGGGAGACGGCCTTGCAA
TGTTTTGTTGCCATGTCCAGCTTTCCCCACTCAAAAGTTTATCGCATGCGACCACAGGTC
CTACAAGCAGCAATCAAGGCTCTTGATGATAAGAAAAGGGTTGTTCGCCAAGAGGCTGTT
CGATGTCGACAAACATGGCAATCATCATTTGCTTAAGGTAGTCTTTCTCCTGCCACTGAT
CATAGTTCGGATGCACTCACTGAACAGAGTGTGTTGTAGAGCAAGTATGGAAGATGTGTG
ATAGGCTGTGGTAGCGCTTAGGGTGGTAGAGTACAATGCGGCTCCTTCCTCCTCTGAAAT
GCTTTTGGACTGTAAGTTGTGGCAGGAGCGTAGTTTTTCGGATGAAATTTGGGGAACAAC
AGTTGGATGGTGTATGCCGGTGCATTGGATACAATCTGGCTGACCGCCCTTTTGTCCCCC
TTTCCTTGTATTTATCATGAATGGCCTAGGATCATAGTTGCATTTATTTGTACGACCAGC
TCGCGAATGTATCTTTGGGTCTCCTTATCCATTGCATTTGTGTCTCAAGACGGGAGAATG
CATGAGTCAGATGTGGCCTGGGTGCTGATCATCATGGCAAATTGTTCCCCGTACCAAAGT
AGTTTTTTTAAGCCGTGAGTTCCCCTGGTATGCGCAGCTATATAACTATATATGGTTGT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_19714.1	4313	42 - 1300	99	1257 / 1259	CUST_7106_PI390587928 CUST_40144_PI390587928 CUST_39306_PI390587928	ABC15698
MLOC_19714.3	1907	1 - 1139	100	1139 / 1139	CUST_7106_PI390587928	ABC15698
MLOC_19714.4	4186	1 - 1080	100	1080 / 1080	CUST_7106_PI390587928 CUST_40144_PI390587928	ABC15698
MLOC_19714.2	4230	849 - 1239	99	390 / 391	CUST_40144_PI390587928 CUST_7106_PI390587928	ABC15698