barSeed - Barley Seed Development Database

Probe ABC15470

Source Contig ABC15470

barSeed

Links

Affymetrix Source Sequence (956 bp)

>ABC15470 956
ATGAGGTGATTGAATATCGTGGTCAACCCAAGACTGAATTCCAGCGGTATATACGACTTA
GTCGTAAAGATATGTTGGACTATTCATTTGGTGATGACACTTGTCCTGAAGAAGGCAAGC
TCTTGGACCACCAGCCTTTAAGGCTAAACCAGGATGATTATGACCGAGTCCAGCAGATTC
CGATAAAGAAGGGAGCAAATTTCCGTGACTTGCCAGGCGTCAAGGTTGGAGCGAATAACA
TTGTGGAGTGGGATCCAGAAGTTGAGCGTGTCTACCTCAAGTCTGGCAAACCTTTGGTCC
CTGACTATGCAATGTCCTTCATCAAGGGCAGATCACCAAAGCCGTTTGGTCGGTTGTGGT
GGGATGAGACGGTGCCTACGGTTGTGACCAGAGCAGAGCCGCATAACCAGATCATTCTGC
ACCCGAACCAGGGACGTGTTTTGACTGTCCGCGAGAACGCTAGGCTGCAAGGGTTCCCCG
ACTACTACCGGATGAACGGTCCCATGAAGGAGAAGTACATCCAAGTCGGAAACGCTGTGG
CTGTCCCCGTCGCACGTGCACTGGGCTACTCTCTGGGCCGGGCGTACCAGGGCGAGGTGG
ATGCGGGGCATGATGCGCTGTTTGTCCTTCCCGAGAGCTTCACCAACGTCGGGCAGACCG
GAGCACGGGCAAGGGCTTCCTCCGTTGGGACCCCTGCCGGCGAGGTGGTCGAGCAGTAGA
GCGGAGGCTGTCTGTTGTGTTGTGGTGGCGGTGTTCGAGTCTAGTCCATTTGTCGCGGGA
ACTAAATTGCTGCAGCATGTAAGGATTGCTCGAGTGGTTGGCTGGTTGAACTTGTTGTGA
TCGTTGAGATCCTTAGTCGTAGATGAAGAAACTGGTACTGGTATGTTGTTCCATTGTTGC
TACCTGCCCCATTGACAATTATTATTGTCTGTTCTCCNNAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_11952.2	2581	0.0	44 - 980	100	937 / 937	CUST_2513_PI390587928 CUST_10167_PI390587928	ABC15470 ABC48549
MLOC_11952.1	2570	0.0	61 - 997	100	937 / 937	CUST_2513_PI390587928 CUST_41678_PI390587928 CUST_10167_PI390587928	ABC15470 ABC48549
MLOC_11952.3	2528	0.0	1 - 870	100	870 / 870	CUST_41678_PI390587928 CUST_2513_PI390587928	ABC15470 ABC48549
MLOC_11952.5	1275	0.0	155 - 671	100	517 / 517	CUST_41678_PI390587928	ABC15470
MLOC_11952.4	2486	2e-179	566 - 906	100	341 / 341	CUST_41678_PI390587928 CUST_2513_PI390587928	ABC15470 ABC48549