barSeed - Barley Seed Development Database

Probe ABC14481

Source Contig ABC14481

barSeed

Links

Affymetrix Source Sequence (775 bp)

>ABC14481 775
GCCTTGTCAACCAGGAGATAGGACTGTATAACTCCATGATTGAAAAAGAAGGCACAGATG
GTGAAGAAGCTAAGAGGGCATACATGGCTGCTAGAGAGGAGGCAGACGATGCTGATGAGG
TTGCTGCAGAAGAAAAGGTCTCGTCAGCGCTGATTGAGAAGGTTGATGCTATGCTTCAGG
GATTAGAAAAGGAGATAGATGATGTCGATGCACAAATCGGAAACCGCTGGCAACTGCTTG
ATAGGGATCATGATGGCAAGGTCACTCCTGAGGAGGTAGCGGCGGCAGCAGCTTATCTCA
AGGATACCATAGGGAAGGAAGGTGTCCAAGAGCTCATCAGCAATCTTTCTAAAGACAAAG
AAGGAAAGATCCTTGTGGAAGACATCGTGAAGCTGGCTTCTCAAACTGACGAAAACAATG
AGGACCAAGAGGAAGAATCACGGCAGTAGTTGCGAACACGCTTGAAAATTCATTTTCCGT
GTTGAGATGGACAACCTATTATTTCAGATGAGTATTAGCCATTCGAGTATCAGAGCTACG
TCATGGCAGTGCCGTGTGTAGATCAAAAGGCAGGACATCCATTTTTTGTGCCTCTCCGGG
CTGACTTGGAATGTAACGATCAGTGACTTGCAAGGCAAACTTGCTGTGGGATGCATATAA
GTTCAGTGCTGTGGATCGGCTGTTAAATGGCGACCGTGATTTCGACAGGTTGCTAGGGAA
GTAGAAATGCAGATCGGTTGGACTTGGATTCATGCTACTTTCCGTCCTTAGCTTT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_3335.2	3006	0.0	1 - 626	100	626 / 626	CUST_17159_PI390587928 CUST_19498_PI390587928 CUST_2801_PI390587928	ABC08692 ABC14481
MLOC_3335.1	612	0.0	1 - 414	100	414 / 414	None	ABC08692 ABC14481
AK250433.1	2875	1e-151	2063 - 2527	88	408 / 465	CUST_17160_PI390587928 CUST_17159_PI390587928	ABC08692 ABC08693 ABC14481
MLOC_60130.1	976	8e-109	396 - 698	90	274 / 303	None	ABC08692 ABC14481