barSeed - Barley Seed Development Database

Probe ABC14427

Source Contig ABC14427

barSeed

Links

Affymetrix Source Sequence (1259 bp)

>ABC14427 1259
CGGCGCCCGGGCTCGCGTTCTCTGCCGGCGTGTGCTCGACCTGGGCTTGGGCGGCCACAT
CAGCGGCGGCGGCATGGGCATGATGATGCGCAAGTACGGCCTCTCCATTGACAACGTCCT
CGACGCCACGCTGGTCGACGCCAACGGGAGGCTGCTGGACAAGGAGGCCATGGGGAGCGA
CCTCTTCTGGGCCATCCGCGGCGGCGGCGGCGGGAACTTCGGCATCGTGCTGTCGTGGAA
GGTCAGGCTGGTACCCGTCCCGCCGACAGTGACGTTCTCCAACATCCAGAAGACCATTGA
CCAGGGCGCGGCCAATGCCGTGACCAAATGGCAGGCGCTCGCGCCGGCCCTCCCCGAGGA
CCTCAGCATACGGGTGATCGTGCAGAACCAGCACGCCCTCTTCCAGACCCTGTATCTCGG
CGGCTGCAGCGCGCTGGTGCGCGCCATGAGCAGCCTGTTCCCCGAGCTCGGCATGACGCG
CGCCGACTGCCGGGAGATGACCTGGCTGCAGTCCACGGTCTACATCAACTCCGGCGACAC
CGAGACGCCGGTGGAGACGCTCCTCAACCGGACGACCAGCCTGAGCACCTTCACCAAGAA
CAAGTCTGACTACGTCAAGCAAGCCATCACCAAGGACACGTGGGAGAAGATCTTCCCCTG
GTTCAACAGCTCCGCCGCGGGGATCATGATCCTGGAGCCTCACGGCGGAAGGGTCGGCAG
CATCGCCGACGGCGACACGCCGTACCCTCACCGGAGCGGCGTCCTCTACAACATCCAGTA
CGTGGCGTTCTGGACGGGCAACGGCACGGACGGGCCGAACTGGATCAGTGGCCTGTACAA
CTTCATGGAGCCGTTCGTTAGCAAGAACCCGAGGGGTGCGTACGTGAACTACCGGGACCT
GGACATCGGGGAGAACACGGTGGTCGGCGGTGTCACCAGCTACGAAACCGGCAAGGTGTG
GGGTGAGAGTTACTTCGGGGCCAACTTCCAGAGGCTCGCCGTCACCAAGGGGAAGGTGGA
CGCCAGCGACTACTTCAGAAACGAGCAGAGCGTACCGCCACTTCTCTCGAGGAAGTGAAG
GTGAAACCTGGCCTGTCTATAATCTGAGGACATAAAACTGTAGCAGTGGATATGGCTTAG
AATGGAAGAACCATTCATGATAGCTACTCACGCGTGAAAATTGATGACAATATATTCGCA
TGAGATTTGAGATCTGATGGTATGAACATGAATATTTAAACTGNATAATACATTATACA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_63550.3	1874	0.0	45 - 1303	99	1253 / 1260	CUST_32469_PI390587928 CUST_32470_PI390587928	ABC12286 ABC14427
MLOC_63550.2	2418	0.0	651 - 1909	99	1253 / 1260	CUST_32470_PI390587928 CUST_32469_PI390587928	ABC12286 ABC14427
MLOC_63550.1	1896	0.0	307 - 1387	99	1078 / 1081	CUST_32470_PI390587928	ABC12286 ABC14427
MLOC_49936.1	1859	0.0	275 - 1358	79	860 / 1087	None	ABC14427 ABC14589
MLOC_77123.1	2097	0.0	870 - 1955	78	857 / 1092	None	ABC14427 ABC14589
AK376200	1707	0.0	556 - 1619	78	838 / 1070	CUST_18637_PI390587928	ABC14427 ABC14589
MLOC_63480.1	1771	0.0	154 - 1217	78	838 / 1073	CUST_18637_PI390587928	ABC14427 ABC14589
MLOC_67205.1	1918	2e-141	192 - 1251	76	813 / 1073	None	ABC14397 ABC14427 ABC42051
AK366703	1761	1e-139	523 - 1582	76	812 / 1073	None	ABC14397 ABC14427 ABC42051
MLOC_1973.1	974	2e-77	41 - 445	80	324 / 406	None	ABC12286 ABC14427