barSeed - Barley Seed Development Database

Probe ABC14039

Source Contig ABC14039

barSeed

Links

Affymetrix Source Sequence (673 bp)

>ABC14039 673
GCACGAGGGATTTATTCCCCAAATCCACCGTCGCCAAGGCCAGCCGAGCGCCGACGCTAG
AAGGAGGAGCCGCGCTGGAGGGCTTCTTTCCTTCACGCGCCGGAAGGCGTCACCATGCCG
TGCACCGGCCGTTGGCCGCTGCCACCGCTGTGCGTTAGGCGGCAAGCGCCGCGCTTGGAG
CAGCCTGGCCGAAGGATGCAGCCACGGTGTAGCCGTCCCGCGAGGAACTTAGCCGAGGAG
GCGTCTTCCGGGCCATGGGTCGTCATTGGAGCTTGCCTTGGACAACATTGATACGCCGTC
CTGGAGGGATGCATGATCTTCTTTGCCGTGAAGATGGAGGGGCTGTTGAGACCGCCGGAG
ATGCTGCCTCGATTCTTGCTCGGATGGTACCATTCATGGCTTGACGCTGAAGATTCCGTA
GCCGGACGACCGCCACGCTCCGGTCGTATTGCCACCAGATGCGAGAGATAGCCTCGACGC
CTCGCTGCTGTTAGGCTGCCTCCCCGTCGCTTTCTTCTTGTGTTGGGTTGGCCAAAACGC
TCTCGCATACGAGCGTGCTGATAACGTGTTAAAAGTAAAAGTAAAAGAGAGAGAGAGCGA
ATGATTGAAAATGAACAGTCTTCTCATTGATGAATGTTGGGGTATTTATACCCAGTAAAA
AAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK366617	774	0.0	10 - 656	97	635 / 652	CUST_323_PI390587928 CUST_322_PI390587928	ABC09498 ABC14039
AK362650	626	0.0	1 - 602	89	536 / 605	None	ABC09498 ABC14039
MLOC_4110.1	839	1e-171	126 - 783	84	560 / 670	CUST_40345_PI390587928	ABC09498 ABC14039
MLOC_27838.1	406	1e-160	1 - 404	92	372 / 404	None	ABC09498 ABC14039
AK249813.1	412	3e-117	1 - 369	87	325 / 372	None	ABC09498 ABC14039
AK359136	596	1e-105	12 - 280	93	249 / 269	None	ABC09498 ABC14039 ABC16634
MLOC_4109.1	1858	9e-93	1424 - 1737	87	273 / 314	CUST_40345_PI390587928 CUST_40346_PI390587928	ABC09498 ABC14039
MLOC_4110.2	525	3e-92	10 - 278	90	241 / 269	CUST_40346_PI390587928	ABC09498 ABC14039
MLOC_4109.2	1139	3e-92	771 - 1083	87	272 / 313	CUST_40345_PI390587928	ABC09498 ABC14039
MLOC_4110.3	415	1e-91	11 - 278	90	240 / 268	None	ABC09498 ABC14039
MLOC_32414.1	972	4e-76	684 - 972	85	245 / 289	CUST_1185_PI390587928	ABC14039 ABC16634 ABC20228