- Probe ABC20228
- Source Contig ABC20228
Affymetrix Source Sequence (988 bp)
>ABC20228 988 AATCCTTTGCTCCAATTCAACGCAGAGACCATCGCCTTGCATCTGGTCGCCTCACACGCT GGACGGCGCCGCGCTGGAGTCGCCGCCACGCCTTGCTGCTATGAGTTGGTCATGGCCCTC GCCACCAGCACAGGTGTTGGTCGTGCGCCCACTTCCCGTAGCCGCTGATGCTGGAGGGCG TCGTCAAGCCAGGCCACCGCCGCAGTCAGACATGCTGAGGGAGGCCCGGCGCTTCCGCCG CACCTAGGCGGCACACCGCCGCGAGGAGCCATTCCGGGAGGAGCAGCGCTGCGGGCGGGT CGCCTGTGGGCCGGTGGGGGCTAGGCCGATGGCCGAGCGCGGGGCGCAAGGCATGCCAAG AGGAGTGGCCGCGCCTGGTGCTCGTCGTCCGGGTGCCAAAGGGCAAAGCCAAGGGCGTTA GTCTGCCCATTGGACGTCGATAAGACGCCTCGCTAATGGAAGCAGGCGATACCGCTTGTT AGTTGAGCGCTGGATGAGTTGTCGTCTCGATGGGCAACGATGAAAACAAGTACTCCAATG GTTAGTCCATCCGTTCAAACCTAGCACATGGTCATACCTAATGAAGTTGTGCATTTATTT ACTGAGTGCATATGCAAACCGGATTATCATCGATCCGTTCTTGATGGATTTCAATTTAGC ATGCCTGTGAGGAGATCGGCCTTGCTCCTAGCCGAGGACCGCTCCGGGATGCAGGGCGTC TGAAACCGCGCTGGGAACAACAGTCGTCGATGCGCCTCCAAGAACGGCGGGGAAACTGAC TTCTATCAGGGCGTCTGAAACCGCGCTGGGAACAACAGTCGTCGATGTGCCTCCATGAAC GGCGGGGAAACTGACTTCTATGATTCTATCCATTGTCGTTTCCGATTCTTTCGCCTGGTC GCTCAGGAAAGAGAGTGTTGATAACGTGTAAAGAGTAAAAGAAGAGAAGGAGAATGATAC AATGAACAATCAAAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| MLOC_67244.1 | 552 | 0.0 | 1 - 552 | 99 | 550 / 552 | None | ABC20228 |
| MLOC_818.1 | 1150 | 0.0 | 236 - 1034 | 88 | 707 / 803 | None | ABC16634 ABC20228 ABC48891 |
| MLOC_45899.2 | 837 | 0.0 | 420 - 837 | 95 | 405 / 428 | None | ABC20228 |
| MLOC_819.1 | 1022 | 1e-177 | 363 - 906 | 88 | 479 / 547 | None | ABC16634 ABC20228 ABC48891 |
| AK361581 | 941 | 3e-173 | 199 - 784 | 86 | 517 / 604 | CUST_21837_PI390587928 | ABC20228 ABC48891 |
| MLOC_8824.1 | 1078 | 2e-165 | 2 - 567 | 85 | 499 / 584 | None | ABC20228 ABC48891 |
| MLOC_67246.1 | 433 | 4e-73 | 284 - 433 | 100 | 150 / 150 | None | ABC20228 |
| MLOC_8822.2 | 761 | 3e-94 | 113 - 458 | 85 | 304 / 357 | None | ABC20228 ABC48891 |
| MLOC_8822.1 | 798 | 5e-82 | 170 - 459 | 86 | 258 / 301 | None | ABC20228 ABC48891 |
| AK354392 | 645 | 5e-77 | 25 - 291 | 86 | 234 / 271 | None | ABC16634 ABC20228 |
| MLOC_32414.4 | 1259 | 5e-77 | 238 - 504 | 86 | 234 / 271 | CUST_1185_PI390587928 | ABC16634 ABC20228 |
| MLOC_32414.5 | 1248 | 5e-77 | 238 - 504 | 86 | 234 / 271 | CUST_1185_PI390587928 | ABC16634 ABC20228 |
| MLOC_32414.3 | 905 | 5e-77 | 331 - 597 | 86 | 234 / 271 | CUST_1185_PI390587928 | ABC16634 ABC20228 |
| MLOC_32414.2 | 1478 | 5e-77 | 358 - 624 | 86 | 234 / 271 | CUST_1185_PI390587928 | ABC16634 ABC20228 |
| MLOC_32414.1 | 972 | 5e-77 | 397 - 663 | 86 | 234 / 271 | CUST_1185_PI390587928 | ABC14039 ABC16634 ABC20228 |
| MLOC_45899.1 | 727 | 3e-59 | 420 - 556 | 97 | 133 / 137 | None | ABC20228 |
| MLOC_35148.1 | 262 | 6e-61 | 1 - 128 | 100 | 128 / 128 | None | ABC16634 ABC20228 |
| MLOC_28870.1 | 420 | 1e-58 | 1 - 130 | 98 | 128 / 130 | None | ABC16634 ABC20228 |
| MLOC_19834.2 | 960 | 2e-56 | 397 - 621 | 85 | 192 / 227 | None | ABC20228 ABC48891 |