barSeed - Barley Seed Development Database

Probe ABC12353

Source Contig ABC12353

barSeed

Links

Affymetrix Source Sequence (666 bp)

>ABC12353 666
TAGCTCCCAAAGCACTGAGAGCAGGAAAAGCACCCTCACCGGAGAGGAAGAAATATTGGG
GAGAACATGGCTTTAGCAGTTTGATTGTTGCTGCTCCTGGGCACGAGGTGGAGAGTGTGG
TTGCTGATTTGCTTCCACTCTTGTCTTATTCGGCCCCATTTGCTATCTATCACCAGTATC
TTCAGCCTCTTGCGACTTGCATGCATAGTTTGCAAGTATCAAAGATGGCTATTGGCTTAC
AGATTACTGAACCCTGGCTTCGAGAGTATCAGGTCCTTCCATCGCGCACCCACCCACACA
TGCAGATGAATGCGTTTGGTGGGTATATATTGAGCGGCATCCGGATACACAAGCCAGACC
CGCAGTAAACATGGGAGTGCCAGAGAAGTCATCTGGCATGACGGAGAGCGTGCTTGTCAC
AGTGATTTATACTTGATTCACGCAGTTGTAGTTCTATTTTCCGTATGGGTTGTGGTAATA
CGGTTATGTCGCGGCCTAGCTAGGTCTGAGGAAGATTGCGTGTGCACTTGAAAACAGGCA
TGCCATCCCTAACCTGTGAGAAGGGCATGTAACATATGCCGGCATTGTATACTTGTTGTA
ACCGTGGTCGATTCACATCCCAGTTTTGATTAATTCACTCTTTCTACAAGTGGAACATTG
TCTTGC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK370295	1897	0.0	1186 - 1851	100	666 / 666	CUST_40070_PI390587928 CUST_33766_PI390587928 CUST_29379_PI390587928	ABC12353
MLOC_44694.3	1275	0.0	4 - 669	99	665 / 666	CUST_33766_PI390587928 CUST_29379_PI390587928	ABC12353
MLOC_44694.1	1808	0.0	6 - 671	99	665 / 666	CUST_33766_PI390587928	ABC12353
MLOC_44694.2	1868	0.0	6 - 671	99	665 / 666	CUST_33766_PI390587928 CUST_29379_PI390587928	ABC12353
MLOC_44694.4	1183	0.0	1 - 637	99	636 / 637	None	ABC12353
MLOC_68945.4	2144	3e-152	1195 - 1651	88	406 / 460	CUST_41623_PI390587928	ABC12353
MLOC_68945.3	2227	1e-150	1155 - 1611	88	405 / 460	CUST_33767_PI390587928 CUST_41623_PI390587928	ABC12353
MLOC_68945.2	2000	1e-150	1160 - 1616	88	405 / 460	CUST_41623_PI390587928	ABC12353