barSeed - Barley Seed Development Database

Probe ABC12137

Source Contig ABC12137

barSeed

Links

Affymetrix Source Sequence (919 bp)

>ABC12137 919
AGAGGGTGAGGAAAAGATCGACACAGATCAGTCAGCAGCTGCCCATGATGAACCTGAAGC
TGATGAGAAAATGGAGGAAGAAGATCCTGAATATGAAGAAGATCCCGATGAAGTAGAATA
TGAAGGTGACGAGGACATGGATGATGCCACTGCTGAAGAGCCTGCAGAAGCACAGAATGA
GGATAACGCAAATGAAAGAGAAACCAAACCAGAAGAGGTAACTGCAGAAGAGCCAGAAGA
TGATGGAAAGAGGACAACGGAGAGTCTTAAATTGGAAAAAGTTGCAGAAGAGGGCAAGCA
GTCTGCAGCAGAGAAAGGAGATTTGAAAGAACTTGAAGGGAAATCAGTTGTTAAGGAGGG
AAAGATATCTGGATCACAAAAAGGAGATTCAGCGAAACATGATGTGGTTGATAAGGACCT
GTTGCAGGCTTTTAGGTACTTCGACCAAAACAGAGTTGGTTATATAAAGGTGGATGATTT
AAGGTGCATCCTTCACAACTTGGGGAAATTTTTATCTAACAGGGATGTGAAGGACATGGT
TCAAATTGCTCTTGCTGAGAGCAATTCTGCAAGGGATGGTCGCATTATCTATACAAAGCT
TGTGAAGAAAGCCGATCTCTGATCTGGACCTGATTTTGGTCTTTAGCAGCTCCTTGAGTT
ATGGAACTTGTTTTGTTGGAGATTCTTGACAATGAATCGATGATCAATGGAAAATATACC
ATCCGAATAGTGTACTCTATGTAGCTGGGAGCTAGTTTTCATTTCCTTTAATGAATATTT
GTTAATGAAAGCAACAATTGATATCGTGTATGTTGACTTACTAGGAAAATTCAATAGGAT
TTTTTTTGCACACAGCAAACGTCATGGCCTAATAATAATAACATTTGCTGGTGTTGCATT
TTCAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_15458.1	756	0.0	83 - 756	100	674 / 674	None	ABC12137
MLOC_75016.2	4083	1e-82	1 - 167	100	167 / 167	CUST_22496_PI390587928 CUST_26858_PI390587928 CUST_14142_PI390587928	ABC12137 ABC28939
MLOC_75016.1	3979	1e-82	1 - 167	100	167 / 167	CUST_22496_PI390587928 CUST_26858_PI390587928 CUST_14142_PI390587928	ABC12137 ABC28939
MLOC_75016.3	4309	4e-68	1 - 141	100	141 / 141	CUST_14142_PI390587928 CUST_22496_PI390587928 CUST_26858_PI390587928	ABC12137 ABC28939
MLOC_75016.4	3324	3e-64	1 - 134	100	134 / 134	CUST_22496_PI390587928 CUST_26858_PI390587928 CUST_14142_PI390587928	ABC12137 ABC28939